KEGG   Papilio machaon (common yellow swallowtail): 106718692
Entry
106718692         CDS       T05138                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac03250  Viral life cycle - HIV-1
pmac04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106718692
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106718692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmac04131]
    106718692
   03400 DNA repair and recombination proteins [BR:pmac03400]
    106718692
Membrane trafficking [BR:pmac04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    106718692
DNA repair and recombination proteins [BR:pmac03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106718692
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_14 AAA_22 AAA_5 IstB_IS21 RuvB_N AAA_17 AAA_2 AAA_18 AAA_25 DUF815 AAA_33 AAA_24 nSTAND3 RNA_helicase TniB NACHT PhoH Mg_chelatase ResIII AAA_28 DUF5906 bpMoxR AAA_7 Parvo_NS1 YhdB Cwf_Cwc_15 Viral_helicase1 Sigma54_activat AAA_29
Other DBs
NCBI-GeneID: 106718692
NCBI-ProteinID: XP_014368333
UniProt: A0A194QQ60
Position
Unknown
AA seq 438 aa
MASSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGEKAKESIRAK
CLQYLDRAEKLKEYLKKDRKKKPVKDGESKSEDKKSDSDSDSDDPEKKKLQGKLEGAIVV
EKPHVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKA
VATEANNSTFFSVSSSDLVSKWLGESEKLVRNLFELARQHKPSIIFIDEIDSLCSSRSDN
ESESARRIKTEFLVQMQGVGNDMDGILVLGATNIPWVLDAAIRRRFEKRIYIALPEEHAR
LVMFKLHLGNTRHQLSEQDMKVLATKTEGYSGADISIVVRDALMQPVRKVQSATHFKKIS
GPSPIDPNVIVHDLLTPCSPGDPGAMEMTWMEVPSDKLGEPPVTMSDMLRSLATSKPTVN
DDDMIKLKKFMEDFGQEG
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcatcatctaatacattacaaaaagcaattgacctggtaacaaaggcaactgaagaa
gataagaataaaaattatgaggaagcactaagactctatgaacatggggtggaatacttt
cttcatgctgtaaagtatgaagcgcaaggtgaaaaagctaaagagagcattcgagcaaaa
tgtttacaatatctggatagagcagagaaattgaaagaatatctgaagaaagaccggaag
aagaagcctgttaaagatggagagtctaagagcgaagataagaagagtgatagcgatagt
gactctgatgatccagaaaaaaagaaactgcaaggaaaacttgagggtgccatagttgtg
gaaaagccacatgtaaaatggagtgacgtcgctggcttagaaggagcaaaggaagcattg
aaagaagctgttattttacccattaaatttccccacctattcacaggcaaaaggatacct
tggaaaggtattttactatttggtccacctggtactggtaaatcatatttagccaaagct
gttgctacagaagcaaacaactctacattcttctctgtttcatcatctgaccttgtttcc
aaatggcttggtgaatcagagaaattagtgaggaatttatttgagcttgctcgacaacat
aaaccgagcatcattttcatagatgaaattgattctctttgttcttcacgttctgacaat
gagtctgagtcagctaggaggatcaagacagagtttcttgttcaaatgcaaggtgttggc
aatgatatggatggtatattggtacttggagctacgaatataccttgggtccttgatgct
gctattagaaggcgttttgagaagcgtatatacatcgctctaccagaagaacatgctcgt
ttggttatgtttaagttgcatctcggaaacacaagacatcagttgtccgagcaagatatg
aaggttttagctacaaagacagaaggttattcgggagctgatataagtattgttgttcgt
gatgctctgatgcaaccagtacgtaaagtccaatcggccactcactttaagaaaatttct
ggaccaagtccaattgatcctaacgtgattgttcatgatttgctgactccgtgttctcct
ggtgatccgggggcgatggaaatgacatggatggaagtaccgagtgacaagttgggtgaa
ccaccggtgacaatgtctgatatgttgagatctcttgctacttctaaaccaactgtcaat
gatgatgacatgatcaaacttaagaagttcatggaagattttggtcaagaaggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (35)   
   Pfam (35)   
All databases (118)   

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