KEGG   Onion yellows phytoplasma OY-M: PAM_763
Entry
PAM_763           CDS       T00154                                 
Symbol
uvrB
Name
(GenBank) helicase subunit of the DNA excision repair
  KO
K03702  excinuclease ABC subunit B
Organism
poy  Onion yellows phytoplasma OY-M
Pathway
poy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:poy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAM_763 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:poy03400]
    PAM_763 (uvrB)
DNA repair and recombination proteins [BR:poy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PAM_763 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PAM_763 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD UB2H AAA_7 AAA_30 AAA_19 AAA_22 AAA_5 AAA P-loop_SecA FPRL1_inhibitor AAA_16 UvrD-helicase AAA_11
Other DBs
NCBI-ProteinID: BAF95573
UniProt: Q6YQE1
Position
complement(471114..473126)
AA seq 670 aa
MSLTNLFKLQSSLKPSGDQPQAIQKLVNNFKQGLQEQILLGATGTGKTFTIANIIQHLQQ
KTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDE
IDQLRHSAAGSLLNRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERQALINKLIE
LKYQRNEINFQRGTFRVRGDIIEIIASSSKEIGIRIIFFGNEIENIQNFDVLNGKAITNL
KLITLFPASLYATNTQKLQEGIKRIRQELKEQINHFEKTNQLLAAQKIKMRTLHDLEMLE
QIGNCNGVENYSRHLALKEKGEAPSTLIDFFGNEFLTIIDESHVTIPQIKGMYFGDFSRK
TNLVNFGFRLPSALDNRPLKFHEFQAKMNKVIYLSATPGNYELTKKIPIVEQIIRPTFVL
DPEIEIRPTHNQMDDLYFEIKHQTKNNQRILITTLTINMSEDLTAYLKNLCIKVAYLHSE
IKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTI
GRAARNITGKAIMYADCISPAMQIAIEETYRRRKIQQQYNETMKVTPTALNKTILETISI
KQKESAQNENENGKVKGQKKLQTHTNITAKNKEIKRLQKMMKEAAKTLDFEKAATLRDLI
LELEKKGKLK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagtttaacaaatttatttaaattgcaaagttctttaaaaccaagtggcgaccaaccc
caagcaattcaaaaattggttaataattttaaacaaggtttacaagaacaaattcttttg
ggagctactggcactggaaaaacttttaccattgcaaatattattcaacatttacaacaa
aaaactttggttattgctcacaacaaaacattagcaggacaactctacaacgaattaaaa
gccatgtttcccaacaatcgcgtagaatattttatttcttattatgattactaccaacca
gaagcatatgtagcatcaagcgacacttacattgaaaaagactccaaaatcaacgatgaa
attgatcagttgcgtcatagtgccgcaggttcattacttaaccgcgatgatgtaattgta
gttgcttcggtttcgtgcatttatggagtaggcgaccttaaagattatcaaaaatcaaca
ctacatttacaaattggagataagtacgaaaggcaagcattaattaacaagttaatagaa
ttaaaatatcaaagaaatgaaattaattttcaaagaggaacttttcgagtaagaggtgac
attatagaaattattgcctcatctagcaaagaaattggtatccgcattattttttttggc
aatgaaattgaaaatattcaaaattttgatgttttaaatggcaaagcaattacgaatctt
aaattaattactctttttcctgctagtctatatgctacaaatacccaaaaattacaagaa
ggtatcaaaagaattcgccaagaattaaaggaacaaattaatcattttgaaaaaactaac
caacttttagcagcccaaaaaattaaaatgcgcactttacatgatttagaaatgttagaa
caaataggcaattgcaatggtgttgaaaattattcaagacatttagcactcaaagaaaaa
ggcgaggcaccatcaactttaattgatttttttggaaatgaatttttaaccattattgac
gaatctcatgtaactattccccaaattaaaggaatgtattttggtgatttttctcgtaaa
accaacttagtaaatttcggtttcagactaccaagtgcccttgataacagacctttaaaa
ttccatgaattccaagccaaaatgaataaagttatctatctttcagctactcctggcaac
tatgaattaactaaaaaaatccccattgtagaacaaattataagacctacttttgtcctt
gatccagaaattgaaataagaccaacccacaaccaaatggatgacctttactttgaaatt
aaacaccaaactaaaaataatcaaagaattttgataactactttaactattaatatgagc
gaggacctaactgcttatttaaaaaatttatgcatcaaagtagcttatttacacagtgaa
attaaatctttacaaagacttgaaattttaaaagatctaaggttgggaaaatacgattgt
ttggtgggagttaatcttttgagggaaggacttgacttacctgaagtagctttagtagct
attttggatgccgacaaacaaggttttttaagaaacgaaagaagccttatccaaactatt
ggaagagcagctagaaacattacaggcaaagctattatgtatgctgattgtatttctcct
gctatgcaaattgctattgaagaaacttatcgtagaagaaaaatccaacaacaatacaac
gaaacaatgaaagtaacaccaactgctcttaacaaaactattttagaaacaatttcaatc
aaacaaaaagaaagtgcgcaaaatgaaaatgaaaatggtaaagttaagggacaaaaaaag
ttgcaaacacatacaaatattacagctaaaaataaagaaattaaacggttacaaaaaatg
atgaaagaagctgccaaaacccttgattttgaaaaagcagctacattaagagatttgatt
ttggagttagagaaaaaaggcaaattaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (18)   
   Pfam (18)   
All databases (41)   

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