KEGG   Pediococcus pentosaceus ATCC 25745: PEPE_1484
Entry
PEPE_1484         CDS       T00409                                 
Name
(GenBank) DNA polymerase III, gamma/tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ppe  Pediococcus pentosaceus ATCC 25745
Pathway
ppe03030  DNA replication
ppe03430  Mismatch repair
ppe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PEPE_1484
   03430 Mismatch repair
    PEPE_1484
   03440 Homologous recombination
    PEPE_1484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppe03032]
    PEPE_1484
   03400 DNA repair and recombination proteins [BR:ppe03400]
    PEPE_1484
Enzymes [BR:ppe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PEPE_1484
DNA replication proteins [BR:ppe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PEPE_1484
DNA repair and recombination proteins [BR:ppe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PEPE_1484
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_30 AAA_19 AAA_22 RuvB_N AAA_5 DNA_pol3_gamma3 AAA_24 Cytidylate_kin AAA_16 AAA_assoc_2 TIP49 AAA_7 AAA_14 LPP AAA_18 DnaX_C PIF1 DUF815 Rad17 BRI3BP DUF6779 DUF5660 RNA_helicase Sigma54_activat Mg_chelatase AAA_28 DUF4917 nSTAND3 FapA Sas10_Utp3 FlaC_arch Csm1_N
Other DBs
NCBI-ProteinID: ABJ68515
UniProt: Q03E57
Position
complement(1454199..1455944)
AA seq 581 aa
MSYQALYRVWRPQKFDDMVGQDVVTRTLKNALITEQTSHAYLFTGPRGTGKTSAAKIFAK
AVNCHYLKDGEPCNECVTCKAITEGTLNDVIEIDAASNNGVEEIRDIRDKAKYAPTEADY
KVYIVDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPQKIPLTIISRTQRFDFKRITP
AQSYDRMVYILDQKGIQYDQKALAIIAKAAEGGMRDALSILDQVISFGNEEVTLDNALLV
TGSVNQKLLDQYLTQIFKQETSAALETLHQILDEGKDGQRLIEDLIAVQRNLLLYQEDPQ
LVQEQSLNDLSEAFTEEAAMVTGVELYQMIDTLNSIQQQMRFTTHPDVYLEVLTIKLSQR
KTAKVSTEAPTGSVDNQEVEQLRSEVSQLKQAIQKLQQNVKNTPSNSQSAQPKPKKKAVG
AKQVKTPANLTKIYPILENATKASLNTMQELWRDLMDMLSVTERALMHVSKPVAASKEGV
VVAFNYDFLFEKAVDNEVLRTELQQNLAKLTGSDFKVVYVTVEEWPEVRSGFLNTHHFDK
NQEKSEPEASEQSTPKADEDNQAVKKAVELFGSENVNIKND
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgagttatcaagcattataccgtgtttggcggcctcaaaagtttgatgatatggtcggt
caagacgtcgtcacgaggactttaaaaaatgcattaataactgagcagaccagccatgcg
tatctatttactggtccacgaggaaccggaaaaacatcggcagctaagatttttgctaag
gcggttaattgtcactatcttaaagatggtgagccttgtaatgaatgtgtgacttgtaaa
gcgattactgagggaaccttaaacgatgtaatcgaaattgatgcggcctcgaataatggt
gtcgaagaaattcgcgatattcgagataaggcaaagtatgctccaactgaagcagactac
aaagtctacattgttgatgaagtccatatgctatcaaccggagcatttaatgcgttgttg
aaaactttagaagaaccaccagctaatgtaatttttattttagcaacgacggaacctcaa
aagattccattaactattatttcaagaacacaacgttttgattttaaacgaattacacca
gctcaaagttatgatcgcatggtctatattttggatcaaaagggaatccagtacgatcaa
aaggctttagcaattatcgccaaggctgctgaaggtgggatgcgagatgcgttaagtatt
ttggatcaagtgatctcatttggtaacgaagaagtaactttagataacgccttattagtt
acaggaagtgttaaccaaaaactattagatcagtatttaacgcaaatttttaagcaagaa
acatcagcggcattagaaactttgcatcaaattttagatgagggtaaagatggacaacga
ttaattgaagacttaattgctgtccaaagaaatttactcttataccaagaagatccccag
ttggtgcaagaacaaagcttgaatgatctatcggaagcttttactgaagaagcagctatg
gtgactggcgtggagctatatcagatgattgatacgttgaatagtattcaacaacaaatg
cgcttcacgactcacccagatgtctatttggaagttttgacgattaagctatcacaacga
aaaactgcgaaagtttccaccgaagccccaaccggttccgtggataaccaagaagtggag
cagttacgttcagaagtcagtcaattaaaacaagcaattcaaaagctacaacaaaatgta
aaaaatacgccaagtaattcacaatcagctcagcctaaacctaagaaaaaagcggtaggg
gctaaacaagttaaaactcctgctaatttaaccaagatttatccgatcttggaaaatgct
actaaggccagtttaaatacaatgcaggaactctggcgcgacctaatggatatgctatct
gttacagaacgggctttaatgcacgtttctaagccagttgcagctagtaaagaaggagtg
gtcgtagcgttcaattacgactttctgtttgaaaaggccgtcgataatgaagtgcttcgt
actgaacttcaacaaaatttagctaagttaactggttccgattttaaggtagtttatgtt
acagttgaagagtggccagaggtgcggtcaggtttcttaaatactcatcattttgataag
aatcaagaaaaatctgaaccagaggcatcagagcaatctacacccaaagcggatgaagat
aatcaagctgttaaaaaagcggtcgaattatttggctctgaaaatgtaaatataaaaaat
gattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (59)   

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