KEGG   Paenibacillus polymyxa E681: PPE_03592
Entry
PPE_03592         CDS       T01319                                 
Name
(GenBank) helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ppy  Paenibacillus polymyxa E681
Pathway
ppy03420  Nucleotide excision repair
ppy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PPE_03592
   03430 Mismatch repair
    PPE_03592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppy03400]
    PPE_03592
Enzymes [BR:ppy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PPE_03592
DNA repair and recombination proteins [BR:ppy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PPE_03592
   MMR (mismatch excision repair)
    Other MMR factors
     PPE_03592
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 SLFN-g3_helicase AAA_22 Viral_helicase1 DEAD AAA_30 AAA_16 NACHT Catalase_C PhoH ResIII nSTAND3 T2SSE Mg_chelatase AAA_11
Other DBs
NCBI-ProteinID: ADM71409
UniProt: E0RLT2
Position
complement(3929408..3931549)
AA seq 713 aa
MKNEFQSAYQEEQHRLSLAMEEIDRRLERLRNTPVYTGHDFTEQILESAREEKRQALTKS
SQEPYFGRMDFDERGRGQRKQLYIGKVGVEREETSAYPLVIDWRAPIASLFYSFTGGEET
ASYEAPEGTIEGLVYLKRNVVIRKRILERVADTYNRESDEPAVSDEFLVYRLGENKDNRL
RDIVSTIQAEQDQIIRAAKNTALVIQGVAGSGKTTVALHRLAFLLYQYKDQVSADKMVIF
APNHMFLDYISDVLPELGVGNIQQSTFADWALDLLGLDLPLADPAETLSYWFESGSLRKE
SMDEAPGRFKGSVHFMELLQAFVERLEPISVPEGDFSPWDGAVLPRAEILNWFNEEYKPY
PLAKRKERVLARVHRWIEMELKKSPSAAALKERKKKAGTREKAYAKKWPQYDALTLYKQL
FQAAKGLPADTAAEMKASLPTAIFKTTQSDLRKQIIREEDLTALVYLHVLIHEVESSQRF
DHVVIDEAQDFSPFHIALLDLFVKGHSFTILGDLSQGIHEYRGVRAWEEMSSLFAPEQTG
YFALTRSYRSTLEIIEFANTILEQGVRGGITAVPVFRSGDPVRTMSYDSSVREQSLLTAL
EELSSKEYRTVSVLTRTLKEAVELHEVFTSAGLDVNLIDGGKKQYEGGLSVLPVYLSKGL
EFDAVIVADADHEHYGERAWDAKLLYVGCTRALHELWLLHDGSLPSYVQAQTE
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgaagaatgagtttcaaagtgcctatcaagaagaacagcacaggctgtcgcttgctatg
gaggaaattgatcggagactagagcggcttcgcaatacgccagtgtacactgggcacgac
tttacggagcaaatactggaatccgcacgggaggaaaaacgccaggctttgaccaaaagc
tcgcaggagccttattttgggcgtatggattttgacgaacgcggtagagggcagcgcaaa
cagctttatatcggtaaagtcggggtggagcgggaagaaacatcagcgtacccacttgtg
attgattggcgtgcaccgattgccagcttgttttactcctttactggcggagaagaaacc
gcttcgtatgaagcccctgagggaacgattgagggcttggtgtatctgaagcgcaacgtg
gttattcgtaaaagaattctggaacgggttgcggatacatacaaccgtgaaagtgacgag
ccagccgtttccgatgagttcctcgtttatcgtttgggagagaacaaggacaaccgttta
cgagatatcgtatctaccattcaggcggagcaggatcagatcatccgcgcggctaaaaat
acagcccttgttattcagggggtagcgggtagtggcaagacgacggtagctctgcatcga
cttgcatttttgctgtatcaatacaaggatcaggtttcagcagacaaaatggttattttt
gcaccaaaccatatgtttctcgattatatttcagatgtacttccagagctgggggtcggg
aatattcagcaaagtacatttgcagactgggcactggacttattgggtttggatttacct
ttggctgatcctgccgaaacattatcttattggtttgagagtggcagtctgagaaaggaa
tccatggatgaggcgccgggaagattcaagggttcggttcactttatggagttgcttcaa
gcttttgttgaacgactggagcccatctccgtgcccgagggggatttttcaccatgggat
ggagcggtgctgccgcgagctgagattttgaattggttcaatgaggaatataagccctat
ccgctcgcgaagcggaaggagcgtgtgctggcaagagtgcatcgctggattgaaatggaa
ctgaaaaagtccccctcggcggcagcgctcaaggaacgcaagaaaaaggcagggacacgg
gaaaaggcatatgctaaaaaatggccacaatatgacgcgctgacgctctataagcagctt
tttcaggcagctaaagggttacccgcagatacggctgcagagatgaaggcttctctgccg
actgctatttttaagaccacacagtcggacctgcgaaaacagattatccgtgaagaagat
ctgactgcgttagtgtatcttcacgtgctgattcatgaggtagagtcatctcagcgtttt
gaccatgtggtcattgatgaagcgcaggatttttcaccttttcatatcgccttgctggat
ttgtttgtaaaagggcattcctttaccatattgggtgatctatcgcagggaattcatgaa
tatcgtggtgtacgtgcgtgggaggaaatgagttctctttttgcgccagaacaaacgggg
tattttgcacttacacggagttatagatctaccttggaaattatagaatttgcaaatacg
attttggagcagggagtacgtggcggtattacagcagttccggtatttcgtagtggcgat
ccggtgcgtactatgtcttacgactcatcggtgcgtgagcagagtttgctcaccgctcta
gaagagctgtcttccaaggagtatcgtactgtttctgtgctgacccgtaccttaaaagag
gctgtggagctacatgaggttttcacaagcgcggggttggatgtgaatttgattgacggt
ggtaaaaagcaatatgaaggcggtttgtcggtactgcctgtgtatctatccaaaggtctg
gagttcgatgcagttattgtggcggatgctgaccatgagcattatggagaacgggcatgg
gatgccaagctgctgtatgtaggatgtacccgtgcgctgcatgagctgtggctcttgcat
gatggctcacttcctagttacgtacaggcacagacggagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (29)   

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