KEGG   Pseudoalteromonas rubra: AT705_12835
Entry
AT705_12835       CDS       T04179                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
prr  Pseudoalteromonas rubra
Pathway
prr03420  Nucleotide excision repair
prr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:prr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT705_12835 (uvrD)
   03430 Mismatch repair
    AT705_12835 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prr03400]
    AT705_12835 (uvrD)
Enzymes [BR:prr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT705_12835 (uvrD)
DNA repair and recombination proteins [BR:prr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AT705_12835 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AT705_12835 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 AAA_12 AAA_11 SAP18 AAA_22 ChrB_N DEAD
Other DBs
NCBI-ProteinID: ALU45089
UniProt: A0A0U2ZBA7
Position
1:complement(2970755..2972920)
AA seq 721 aa
MDVSELLDGLNDKQREAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRTRVEETLQNPVGGMWIGTFHGLAHRILRAHHREARLPESFQILDSDDQL
RMIKRLLKSMNIDDKKWPPKQLSWYISARKDEGQRPKDITAHDVNEQLMLQVYTAYQDAC
DRAGLVDFAEILLRCYEVLQQNPTLLRHYQQRFRHMLVDEFQDTNSIQYLWLKLLAGSDS
NIMIVGDDDQSIYGWRGARIENIKRFLTDFDAQTIRLEQNYRSTGTILKASNALIQNNAE
RMGKSLWTDGNQGEPISVYAAFNELDEARFMVGKVKSWLQGGNALSDCAVLYRSNAQSRV
LEEALLQEGLKYRIYGGMRFFERQEIKDALSYLRLISNRNDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAVLEQGHLAGRAATAIRRFIELVEQLDDKLMELELAEQAK
TTIEQSGLLAMYQAEKGEKGRARVENLEELINACGQFDLPVEEEFTSPLQGFLAYTSLES
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSHEESGRLEEERRLCYVG
MTRAMEKLYISHAESRRLYGQEKYHSPSRFLREIPEDCLEEIRIKTQVSRPVASGRFSAS
VSHAVFEDSNFNLGQRVLHAKFGAGTVLNYEGCGAQSRIQVNFDDVGSKWLVTAYARLQE
L
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggacgtatcagaattactcgatggcttaaacgacaaacaacgtgaggcggttgccgca
ccgctacaaaatatgctggtattagcaggcgcaggctcgggcaaaacccgggtgctggtg
catcgcattgcctggctcatgcaggttgagcaagcttctgcgtatagcatttttgccgta
acctttaccaataaagccgccaaagagatgcgtacccgggtcgaggagaccttacaaaac
ccggtcggtggtatgtggatcggtaccttccatggcctggcccatcgtattttgcgcgcc
catcatcgcgaagccaggctaccagagtcgtttcagatcctggattccgacgaccagctg
agaatgatcaaacgcctgctgaaatcaatgaacatcgacgataaaaagtggccacctaag
cagctcagttggtatatcagcgcacgcaaagacgaaggtcagcgccccaaagacatcacc
gctcatgacgtcaacgagcaattgatgttgcaggtctatacagcctatcaggatgcctgt
gatcgcgccggtctggtcgactttgccgaaattttgctgcgttgctatgaagtactgcaa
caaaatcccacgctactgcgccattatcagcagcggttccgccatatgctggtcgacgaa
ttccaggataccaacagcattcagtatttatggctaaaactactcgccggcagcgacagc
aacatcatgatagtgggcgatgacgaccaaagtatttacggttggcgaggcgcacggatt
gagaatatcaaacgctttttaaccgacttcgacgcgcaaacgattcgccttgagcaaaac
taccgctccaccggcaccatattgaaagcgtctaatgccctgatccagaacaatgctgag
cgtatgggtaaaagcctctggaccgacggtaatcagggtgaacctatttccgtgtatgcc
gcctttaacgagctggacgaagcccgctttatggtcggtaaagtcaagtcctggctccag
ggtggtaacgcactgagcgactgtgccgtgctttaccgcagtaacgcccaatctcgggtg
ctggaagaagcgctgttgcaggaaggcctcaagtatcgcatttacggcggtatgcgcttc
ttcgaacgtcaggagatcaaagatgctctgtcttatctgcgcctgatcagcaaccgcaat
gacgacgccgcgtttgaacgagtgatcaacactccggcacgcggtatcggcgacaaaacc
ctgagccatattcgagactgtgcccgagccgagtcactccccctgtggtacgcggccaaa
gccgtgctggagcaagggcaccttgcaggccgtgccgctaccgccattcgtcgcttcatt
gaactggtcgaacagctggacgataaattgatggaactcgaactggccgagcaagccaaa
accaccatagaacaatccggtcttctggccatgtatcaggctgaaaaaggtgaaaaaggc
cgtgcccgggtagaaaacctcgaggaattgatcaacgcctgtggtcagtttgatttaccc
gtggaagaagagttcacctcgccactacaagggttcttagcctatacctcactggaatct
ggcgaaggccaggccgacgaacatgaagatgccgtgcagatgatgacgctgcactcagcc
aaaggcctggaattcccattggtctttatggtaggcgtagaagaaggcatgttcccctcg
cagcaaagccacgaagaatcgggccgtctcgaagaagagcgccgcctgtgttacgtcgga
atgacccgggccatggaaaagctttacatcagtcacgcggaaagccgccgtttgtatggg
caggaaaaataccatagcccgtcacgctttttacgtgaaattcccgaagactgtctggaa
gaaattcgcattaagacacaggtttcacgacccgtagcaagtggccgcttcagtgcgtca
gtgagccatgccgtctttgaggacagcaactttaatctgggtcagcgcgttttacatgcc
aaatttggcgctggcacagtactcaattatgagggctgcggtgctcagtcacgcattcag
gtaaactttgacgatgtcggcagcaagtggctggtcaccgcctatgccagactgcaagaa
ctctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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