KEGG   Pantoea stewartii subsp. stewartii: DSJ_19840
Entry
DSJ_19840         CDS       T04970                                 
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
pstw  Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pstw03009]
    DSJ_19840
Enzymes [BR:pstw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     DSJ_19840
Ribosome biogenesis [BR:pstw03009]
 Prokaryotic type
  rRNA helicases
   DSJ_19840
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 P-loop_SecA FlgT_C
Other DBs
NCBI-ProteinID: ARF51345
UniProt: H3R9N2
Position
complement(3992956..3994335)
AA seq 459 aa
MTAFSSLNSLPDSQLDNLREMGYTSMTPVQAASLPAILAGRDVRAQAKTGSGKTAAFGIG
LLHHIDSARFQTQALILCPTRELADQVSNVLRQLARFTRNIKILTLCGGQPMSAQRDSLV
HPPQIVVGTPGRILDHLKRETLQLDSLRTLVLDEADRMLEMGFRDDMETIIAATPAARQT
LLFSATWPDGIATLSQRFQRDALSVVTEEVSELPAIEQQFIEATHGEKLSLLISLLSERQ
PSSCVVFCNTKRECDDIAAALNARDISALPLHGDLEQRDRERVLIRFANGSGRVLVATDV
AARGLDIKSLSLVVNYQLAWDPEVHLHRIGRTARAGEEGAAVSFVAADEMARAHALEDFL
QQKLPWVAASALRKSSKPLPAAMMTICIDGGRKAKIRPGDILGALTGEAGYRADQIGKID
LTPTHAYVAIEAAQAKSALVKLKQGKIKGKTCRAVLLKD
NT seq 1380 nt   +upstreamnt  +downstreamnt
gtgaccgctttttcctcgcttaattctcttcccgatagtcaactcgataacctgcgcgag
atgggctataccagcatgacgccggttcaggccgcctcgctgcccgctatcttagccgga
cgcgacgttcgtgcgcaggcaaaaaccggcagcggcaaaacggccgcatttggtattggc
ctgttgcatcatatcgacagtgcgcgttttcagactcaggcgctgattttatgtccgacg
cgagaactggccgatcaggtcagcaacgttctgcggcagttagcgcgcttcacgcgcaat
atcaaaattctgaccttatgcggcggccagcccatgagtgcgcagcgcgattcgctggtg
catccgccgcagattgtggtcggtacgccgggccgtattcttgaccatctcaagcgcgaa
acgctgcagctcgacagtctgcgcacgctggtgctggacgaagccgatcggatgctggaa
atgggctttcgtgacgatatggaaaccattatcgccgccacgcccgccgcgcgtcagacg
ctgctgttctctgccacctggccagacggcattgcaacactgagccagcgctttcaacgt
gatgcgctgagcgtcgtgacggaagaggtcagcgaactgccggcaatcgaacaacaattt
attgaagcgacgcacggcgaaaaattgtcgctgctgattagcctgctcagcgaacgccag
ccatcgtcctgtgtggtgttctgcaacaccaaacgcgaatgtgatgatattgccgccgcg
cttaacgcccgcgatatcagcgccctgcccctgcatggcgatctcgaacaacgcgatcgc
gaacgtgtgctgatccggtttgctaacggcagtggtcgcgtgctggtggcgacggacgtc
gcggcccgcggcctggacatcaagtcgctgtcgctggtggtgaactaccagctggcgtgg
gatcccgaagtgcatctgcatcgtatcggccgtaccgcgcgggcgggcgaagaaggcgct
gccgtgagttttgtcgcggccgatgaaatggcgcgcgcgcatgcgttagaagatttcctg
cagcagaagctgccatgggttgccgccagtgcgctcaggaaaagcagtaaaccgttgccg
gcagccatgatgacgatttgcattgatggtgggcgtaaagccaagattcggcccggcgat
attctgggtgcgctgacaggagaagcaggctatcgcgccgatcagatcggtaagattgat
ctcaccccgacgcacgcttatgtagcgattgaagcggctcaggcaaaatctgcgctggtc
aaacttaagcagggcaaaatcaaaggcaaaacctgccgggctgtactgctgaaagactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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