KEGG   Paenibacillus vortex: PVOR_29289
Entry
PVOR_29289        CDS       T05385                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pvo  Paenibacillus vortex
Pathway
pvo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PVOR_29289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvo03019]
    PVOR_29289
   03009 Ribosome biogenesis [BR:pvo03009]
    PVOR_29289
Enzymes [BR:pvo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PVOR_29289
Messenger RNA biogenesis [BR:pvo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PVOR_29289
Ribosome biogenesis [BR:pvo03009]
 Prokaryotic type
  rRNA helicases
   PVOR_29289
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CMS1 AAA_30
Other DBs
NCBI-ProteinID: EFU38704
UniProt: A0A2R9SMU7
Position
complement(115136..116482)
AA seq 448 aa
MTSTTFHTLGITEDLSSRLAEFGIVTPSPVQAEAIPPILEGKDVLATSQTGTGKTLAYLL
PVLQSIDPEIKGAQKLILAPTQELAVQIVRESERYGETRGIGVLGLIGGAAAKRQIEKLK
SHPQLIVGTPGRVRELIEIRKLKMHQVTTIVVDEVDQVFNLGGAGDVDRILRSALRDRQL
VFLSATVSPETAELVKKEMDQPVEIGIDPEQRTPSALEHYYFVTEERDKLDMLRRVVRHY
NPDRAIVFVNATEDLAEVEAKLNYLGLNAAAIYGDADKMTRSRVLNAFREGRTKLLVASD
VAARGLDIEGLGMVINYDPPIDAEHYTHRAGRTGRMGRSGMAITLVTDRQTFIMRKFNRE
LGISIEERALYGGKVRTPRSAPPDRRSGARGPAGETARKDKPAGKPASISVQGKAGSGKA
SGERQSERERDRKNKGAPKWLKNKPPRG
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgacttcgactacatttcatacattaggaataacagaggatttgtcctccagacttgcg
gagttcggcatcgttacgccttctcccgttcaggctgaagctatcccgcccatactggaa
ggcaaggatgtgcttgcgacttcccagacaggcacaggaaagacactggcatatctgctg
cccgtgcttcagagcatcgatccggagatcaagggagcacagaaactgatccttgctccg
acacaggaacttgctgttcagattgtcagagagagtgagcgttacggggagacccgagga
atcggtgtgctcggattaatcggcggggccgcggccaagcgccaaatcgagaagttgaag
tcgcatccgcagctgattgtcgggacaccggggcgagtacgtgagctgatcgaaatcagg
aaactcaagatgcaccaagtgaccactattgtggttgacgaggtggatcaggtgttcaat
ctcggcggtgccggcgatgttgatcgcattctgcgcagtgcgcttcgcgaccgccaattg
gtattcttatccgccacggtgagtccggagacagcggagcttgtcaagaaggagatggac
cagccagttgagatcgggatcgatccggagcagcggacaccgtctgcgctggagcattat
tattttgtgacggaagagcgtgacaagttggacatgctgcgcagagtggtgcggcattac
aaccccgatcgggctattgttttcgtgaatgccaccgaggatttggcagaagtcgaggcg
aagctgaactatctgggattaaatgcagctgctatatacggagatgcggacaagatgaca
agaagccgcgttctgaatgcgtttagagaagggcggaccaaacttcttgtagctagtgac
gttgcggccagggggcttgatattgaagggctcgggatggtgatcaactacgatccgccc
attgatgcggagcattatacccaccgtgccggtcgtacagggcgtatggggcgaagcggc
atggcgattacgcttgtcacggaccgtcagacgttcattatgcgcaagttcaatcgtgag
cttggcatttcgattgaagagcgcgcactctatggcggcaaggtaagaacaccgcgttca
gcgcctccggaccggagaagcggcgcccgtgggccagcaggggaaaccgcccgtaaagat
aagccagcgggcaagccggcttccataagtgtgcaaggaaaagcgggaagcggaaaggca
tccggtgaacggcaaagcgagcgggagcgcgaccgcaagaacaagggtgctccgaaatgg
ctgaagaataagcctccacggggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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