KEGG   Pectobacterium parmentieri WPP163: Pecwa_0645
Entry
Pecwa_0645        CDS       T01106                                 
Name
(GenBank) TraG-family protein
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pwa  Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:pwa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pwa02044]
    Pecwa_0645
Secretion system [BR:pwa02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   Pecwa_0645
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87
Other DBs
NCBI-ProteinID: ACX86469
Position
683808..685919
AA seq 703 aa
MSDRYVMESLLRPAVELYTATTAWSATYICLTAPWAVALAPSVSWVTAAGFGVLALKRTR
QGLQILRYRRNIRRLPRYVMSSKQIPVSNRYLFLGRGFQWTQKHTQRLLEARRPETECYV
QPSVIYRMARDLEKKLEYSLPYLCRLTQSDTVFNPVRPLPPVGGSPIYHGVEPDESDIAY
DLGERVGHSLVMGTTRVGKTRLAELLITQDIRRGDVTIVFDPKGDADLLKRMWAEARRAG
RESEFHVFHLGWPDISARYNAIGRFSRISEVASRVAGQLSSEGNSAAFKEFAWRFVNIIT
RALVALGQRPDYSLILRYVTNIGDLYETYVENLLSTQAPQLWVTVENLLSSGMLNERDLP
RNMQGQANAMKVWAIETVLGSDEGKKIWDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKL
TTGKTAALLAPDYTDMDDPRPIFDWQEVIRKRGIVYVGLDALSDAEVASAVGNSMFADLV
SVAGYIYKFGIGGEAPQKKIPINLHCDEFNELMGEEFIPLINKGGGAGIQVTAYTQTLSD
IEARIGSSAKANQVIGNFNSLIMLRVRENSTAELLTSQLPEVDVYTKTLVSGVTDITNPD
QGSDFTSNVQDRVSNVRMPMITPADIINLPKGQAFALLEGGRLWKIRMPLPDSANDPFMP
ESISRIAEYMQQNYRTGETWWTGSTLPSDSLTGSAFEPKDEVA
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgagtgaccgttatgtgatggagtcgttgctacgccctgcggttgagttatatacagcg
acaacggcgtggagtgcgacttatatctgtctgaccgctccctgggctgttgcgcttgca
ccgtccgttagttgggttacggcggctgggttcggtgtgctggctctgaaacgaacacgt
caggggctacagatccttcgttaccgtcgcaatatccggcgacttccccgttatgtgatg
agtagtaaacagatccccgtgagtaaccgttatctgtttctcgggaggggatttcagtgg
acgcagaaacatactcagcggctcctggaagctcgtcggccagagacagagtgctatgtt
cagccatccgtcatttatcgtatggcgcgtgacctggagaaaaaacttgagtacagcctg
ccatatctctgccggcttactcaatccgacaccgtctttaaccccgtcagaccgttacct
cccgtagggggaagccccatctatcacggtgttgaaccagatgaatccgatattgcttat
gatcttggggaacgtgtagggcactcgttagttatgggaacaacgcgtgtgggtaaaaca
cgcctggcagaattattgatcacgcaggatatccggcgtggtgatgtcaccatcgtattt
gaccccaaaggagatgctgatctgctgaaacggatgtgggcggaagcgcggagagctgga
agggaaagtgagtttcatgttttccatcttggctggccagatatcagcgcgcgttataac
gcgatcgggcgttttagccgaatttctgaagtggcttctcgtgttgctggtcagctttca
agtgaaggtaattcggctgcttttaaggagtttgcctggcgattcgtcaatatcattaca
cgggcgctggttgccctgggccagcggcctgattacagcctgatactccgttatgtcacc
aatataggcgacctatacgaaacctatgtcgaaaatctgttaagcactcaagctccacaa
ctgtgggtcacggtggagaacttacttagctcaggcatgctcaatgagcgggatcttccc
cgaaatatgcaagggcaagcgaacgcgatgaaagtgtgggccatcgagaccgttcttggt
agtgatgaaggtaaaaaaatatgggatccggttctggatggattgcggtcggccgtacgt
tatgaccggacctattttgataaaattgtggcgtcgttattgcccttgctggaaaaactg
acgacgggaaaaacagcggctttactggcacctgattacaccgatatggatgatcctcgg
cccatctttgactggcaggaagtcattcgaaaacgaggaattgtgtatgtcggactcgat
gcgctatcggatgcggaggtcgcctcagcggtaggaaacagcatgtttgcagacctggta
tctgttgccgggtacatctacaagtttggtatcggcggtgaagctccacagaaaaaaatc
cccattaacctccactgcgatgagtttaacgaactgatgggtgaggagtttataccgctc
attaacaaaggcggcggcgcagggattcaggtaactgcctatacacagaccttgtcggat
attgaagctaggattggcagtagtgccaaggccaaccaggtgattggtaacttcaactcg
ttaatcatgctacgggttagagaaaatagtacagcggagttgctgaccagccaacttcct
gaagtggatgtctataccaagacgctggtttccggcgtaacggatattactaatcctgac
cagggttctgactttaccagtaatgttcaggatcgtgtcagtaatgtcaggatgccaatg
attaccccagctgacattatcaacctaccgaaagggcaggcgtttgcattgcttgagggg
gggcggttgtggaaaatccgtatgccattacctgatagcgcaaatgacccgtttatgccg
gagagtatcagccgcattgccgagtacatgcagcagaattaccgcaccggcgaaacctgg
tggacggggagtacattgccttctgatagcctcacaggatctgcctttgagccaaaagat
gaggtggcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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