KEGG   Rhodospirillum centenum: RC1_1881
Entry
RC1_1881          CDS       T00785                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit, putative
  KO
K03702  excinuclease ABC subunit B
Organism
rce  Rhodospirillum centenum
Pathway
rce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RC1_1881 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rce03400]
    RC1_1881 (uvrB)
DNA repair and recombination proteins [BR:rce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RC1_1881 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RC1_1881 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 P-loop_SecA AAA_16 AAA_5 SWI2_SNF2 DUF87
Other DBs
NCBI-ProteinID: ACI99277
UniProt: B6INU3
Position
complement(1939704..1942040)
AA seq 778 aa
MPQDRPDTAPTAGSAAAGSAAAGSDPAGSAVMPWRTRVESPPQRAPLTVVSEFAPAGDQP
RAIAELTEGLRRGERDQVLLGVTGSGKTFTMAHVIQALQRPTLILAPNKTLAAQLYGEMK
SFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESTINEQIDRMRHAATRALLERRDAVI
VASVSCIYGIGSVETYQAMTVDVVVGQALHRQKFLQQLVELQYRRNDAGFSRGTFRVRGD
TVELFPAHMEDRAWRFSLFGDEVEAIHEFDPLTGEKQGALKEVRIYANSHYVTPKPTLQQ
AVEQIKRDLKLRLEEFYAEGKLLEAQRLEQRTTFDIEMMAATGSCAGIENYSRYLSGRNP
GEPPPTLFEYLPEDALLIVDESHVMVPQIGGMFRGDFMRKSTLADFGFRLPSCKDNRPLK
FEEWDTMRPPTVFVSATPGPWELERTGGVFVEQVVRPTGLVDPEVIVRPTETQVDDVMAE
VREVVAKGLRVLVTTLTKKMAEALTEYMMEAGIKVRYIHSDVETLERIEIIRDLRLGVFD
VLIGINLLREGLDIPECGLVAILDADKEGYLRSRTSLIQTIGRAARNLEGRAILYADKET
ASMKAALEETARRRARQLAYNAEHGITPESVRKNIADVLGSVYERGDRVEVDTGAAGNLL
AGKDIKAVIADLEKKMRTAAADLEFETAAKIRDEIRRLEAIDLGLAAPGIPGSTALRASA
RGDHARADHAAAKGRGRGDTKSAKGAPKGAPKGAHATDDGGLDVGGVQFGGTRTRKRR
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgccccaggaccgccccgacaccgcccccaccgccggctctgctgctgccggctctgct
gccgccggctccgatcccgccggttccgccgtgatgccctggcgcacgcgggtggaaagc
ccgccgcagcgcgcgcccctgacggtggtcagcgagttcgccccggcgggcgaccagccg
cgcgccatcgccgagctgacggagggcctgcgccggggtgagcgcgaccaggtgctgctg
ggcgtcaccggctcgggcaagaccttcaccatggcgcacgtcatccaggcgctgcagcgc
ccgaccctgatcctggcgccgaacaagacgctggccgcgcagctctacggggagatgaag
agcttcttccccgacaacgcggtcgaatacttcgtcagctactacgactattaccagccg
gaagcctacgtcccgcgcaccgatacctatatcgagaaggaatccacgatcaacgagcag
atcgaccgcatgcgccatgccgccacccgcgccctgctggagcggcgcgatgcggtgatc
gtggcctcggtctcctgcatctacggtatcggctcggtggagacctatcaggcgatgacg
gtggacgtcgtcgtcgggcaggcgctgcaccggcagaagttcctccagcagctcgtggag
ctgcagtaccgccggaacgatgccggcttctcccgcggcaccttccgggtgcgcggcgac
acggtggagctgttccccgcgcacatggaggaccgggcctggcgcttctccctgttcggg
gacgaggtggaggcgatccacgagttcgaccccctgaccggggagaagcagggggcgctg
aaggaggtgcggatctacgccaacagccactatgtcacgcccaagcccacgctccagcag
gcggtggagcagatcaagcgcgacctgaagctgcggctggaggagttctacgccgagggc
aagctgctggaagcgcagcggctggagcagcgcaccaccttcgacatcgagatgatggcc
gccaccggctcctgcgccggcatcgagaactattcccgctacctctcgggccgcaatccg
ggcgagccgccgccgaccctgttcgagtatctgcccgaggacgcgctgctgatcgtggac
gagagccacgtcatggtgccccagatcggcggcatgttccgcggcgacttcatgcgcaag
tccacgctggcggatttcggcttccggctgccctcctgcaaggacaaccggccgctgaag
ttcgaggagtgggacaccatgcgcccgcccacggtcttcgtctccgccaccccggggccc
tgggagctggagcgcaccggcggcgtcttcgtcgagcaggtggtgcgccccaccggcctc
gtggacccggaggtgatcgtccgcccgacggagacgcaggtggacgacgtgatggccgag
gtgcgcgaggtggtggccaagggcctgcgcgtgctggtcaccaccctgaccaagaagatg
gccgaggcgctgaccgagtacatgatggaggcgggcatcaaggtccgctacatccactcc
gacgtggagacgctggagcgcatcgagatcatccgcgacctgcgcctgggcgtgttcgac
gtgctgatcggcatcaacctgctgcgcgaggggctggacatccccgaatgcggcctcgtc
gccatcctggacgcggacaaggagggctatctgcgctcccgcacctcgctgatccagacc
atcggccgcgccgcgcgcaacctggaaggccgcgccatcctctatgccgacaaggagacg
gccagcatgaaggcggcgctggaggagacggcgcgccgccgcgcccgccagctcgcctac
aacgccgaacacggcatcacgccggagagcgtgcgcaagaacatcgccgacgtgctgggc
agcgtctacgaacgcggcgaccgcgtggaggtggacacgggcgccgccggcaacctcctg
gccggcaaggacatcaaggccgtcatcgcggacctggagaagaagatgcgcacggccgcc
gcggacctggagttcgagacggcggcgaagatccgcgacgagatccgccgcctggaagcc
atcgacctcggcctcgccgcccccggcatccccggcagcaccgccctgcgcgccagcgcc
cggggagaccacgcccgggcagaccacgccgccgcgaagggccgcggccgcggcgacacg
aagtccgccaagggggctcccaaaggcgcccccaagggcgcacacgccaccgacgacggc
ggcctggacgtcggcggtgtccagttcggcggcacccggacccggaagcggcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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