KEGG   Roseobacter denitrificans: RD1_A0014
Entry
RD1_A0014         CDS       T00376                                 
Symbol
virB4
Name
(GenBank) VirB4 protein, putative
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rde  Roseobacter denitrificans
Pathway
rde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RD1_A0014 (virB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rde02044]
    RD1_A0014 (virB4)
Enzymes [BR:rde01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RD1_A0014 (virB4)
Secretion system [BR:rde02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RD1_A0014 (virB4)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_10 DUF87 CbiA TrwB_AAD_bind SbcC_Walker_B
Other DBs
NCBI-ProteinID: ABI93318
RoseoBase: RD1_A0014
UniProt: Q07GT1
Position
pTB1:complement(14019..16379)
AA seq 786 aa
MLDVLKTRARKDLEASEDQGEHLLVRHLPYVGAVTDDVMMLRDGDLIASFIVEGIAADTA
SEADVDDLSLAFSRTVTQAQSDVGIYVHRFSSVVSPKLTGVAPEVSTFAAAVDQRWQSHI
ETSGLRSRQAMITVTLRPSKVKSLWAKFVSGGVAAQRGTREKDVSRLNEIVDHFMEAVRV
ASPTRLSISSGEWIGLLRAINTGQFFTSPPGAGFMPLADMIAVGRLDFRNDTFVSFGSDS
KDTRYGAVFSIKSYPSNSAPGIFNRFDLPFDMVISQSYTPVNPVESEERISRTARQMQAA
DDAAQTLKDQLVDALDDVASGRIGMGMHHATITVFAGTVAELDEAAASIRGAGQRAGATV
VREDVGARAAFFAQHPGNYAYRARAAMISSTNFADFTALHATPAGHSRAQTPWGESVTIL
PDIRGEPYRFNFHLAGELQERTVGHTLVIGMTGAGKTLGACFLLAQAARLNPRIIAFDKD
QGMEMPLRALGADYAKVRMGEPTGFNPFAAEADERGTAWLTSWLEATLAAQGTLSATQRE
ALSNATRSNMETDPSLRTMRQFRSQLRSVDDGGDLHTRLGLWDDGQYGWLFSGEGQDETL
SFNNDVTAFDLTEIFETQEVRTAWLAYVFRRIERQIEDERPTIILIDEAWKVLDDPFFEA
MLKDWALTLRKKNVVLMLMTQRVDHLVNSAAGGSILESCVTTLVYPNSRYTLDEVAPLNF
TDAEAAFVTSSAGGQRLALIRNGDVSTVVNMDLGALGPLLKVLGGGKGESAPDGWRDDTS
FWKDIG
NT seq 2361 nt   +upstreamnt  +downstreamnt
gtgcttgatgtcctgaaaacccgcgcccgcaaagatctggaagcctcggaagatcagggc
gaacatctgttggtcaggcacctgccgtatgtcggtgctgtcacggatgatgtgatgatg
ttgcgcgatggggatctgatcgcgtctttcatcgtcgaaggcattgcggcggataccgcc
tcggaagccgatgtcgatgatctgtcactggcgttttcgcggacggttacgcaagcgcag
tctgatgtcgggatttacgttcatcggttctcttcagtcgtgtcgccaaagctgacgggc
gtggcccccgaagtctcgacattcgctgccgccgtcgatcagcggtggcaatcgcatatc
gaaacgtccggcctgcggtcacggcaggcgatgatcaccgtcacattgcgcccctcaaag
gttaaatcgctctgggcaaaatttgtatctggcggtgtcgcggcgcagcgcggcacacgc
gaaaaggacgtctcgcgcctgaatgaaatcgtggatcacttcatggaggcggtgcgcgtg
gcgtcgcccacgcggctgagcatttcaagtggcgaatggatcggactgctgcgcgcgatc
aacaccggacaattcttcacctcaccgccgggtgccggtttcatgccgctggctgacatg
atcgcagtggggcgtctggatttcagaaacgataccttcgtgtccttcggcagcgacagc
aaggacacgcgctatggggccgtgttctcgatcaagtcctatccgtcaaactctgcgccg
ggcatcttcaacaggttcgatttgcccttcgatatggtgatttcgcaatcctatacgccg
gtgaacccggttgagtccgaagaacggatcagccggacggcgcgtcagatgcaggcggcg
gatgacgcggcgcaaaccttgaaggaccaactggtcgatgcgctcgatgatgttgcctcc
gggcggattggcatggggatgcaccatgcgacgatcaccgtctttgcgggcacggtggcg
gaactggatgaggcggctgcgagtattcgcggggcagggcagagggcaggggccacggtc
gtgcgcgaggatgtgggcgcgcgcgccgcattctttgcccagcatccggggaattatgcc
taccgcgcccgtgccgccatgatatcgagcaccaacttcgctgatttcaccgccctgcac
gcaacgcctgccggtcacagccgcgcgcagacgccctggggtgagagcgtgacgatcctg
ccggatattcgcggggaaccttaccgcttcaatttccatctggcgggtgagcttcaggag
cgcaccgtgggtcacacgctggtcattggcatgacaggtgcgggcaagacgctcggggcg
tgtttcctgctggcgcaagcggcacggctgaacccgcgcatcatcgctttcgacaaagat
cagggcatggaaatgccgctgcgtgcccttggtgcggactatgcgaaggtgcggatgggt
gaaccgaccgggttcaacccatttgctgctgaagcggatgaacgtggaacggcgtggctc
acatcctggcttgaggcgacgcttgccgcccaaggcacactgagcgccacccaacgcgag
gcgctgtccaatgccacccgctccaacatggaaaccgaccccagcctgcgcaccatgcgc
cagttcagatcgcagctgcgatccgtcgatgatggcggtgatctgcatacgcgtctcggg
ctttgggacgacgggcaatatggctggctcttttccggtgaaggtcaggacgaaacgctg
tcgtttaacaatgatgtcacggccttcgatctgacggagattttcgagacacaagaggtc
cgtaccgcgtggctcgcctatgtgttccgccgcattgaacggcagattgaagacgaacgc
cccacgatcattctcattgatgaggcgtggaaggttctcgatgatccgttcttcgaggcg
atgctgaaagactgggcgctcacgctgcgcaaaaagaacgtcgttctgatgctgatgacc
cagcgcgttgatcatctggtcaacagtgcggcgggcggctccattctcgaaagctgtgtc
accacgctggtctaccccaacagccggtacacgctggatgaagtcgccccgttgaatttc
accgacgcggaagctgccttcgtgacgtcttcggcgggcggccaacggctggcactgatc
cgaaacggcgatgtcagcacggttgtgaacatggacctcggcgcactcggcccgctcctg
aaggtgctgggcggcggcaaaggcgaaagcgcaccggatggatggcgcgatgacaccagt
ttttggaaggatatcggataa

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