GenomeNet

Database: RefSeq
Entry: NP_001273612
LinkDB: NP_001273612
Original site: NP_001273612 
otation
            Annotation Name             :: Setaria viridis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Setaria viridis"
                     /cultivar="A10"
                     /db_xref="taxon:4556"
                     /chromosome="9"
     Protein         1..1250
                     /product="putative disease resistance protein At3g14460"
                     /calculated_mol_wt=139924
     CDS             1..1250
                     /gene="LOC117835282"
                     /coded_by="XM_034714645.1:1..3753"
                     /db_xref="GeneID:117835282"
ORIGIN      
        1 mappqpagtm lslpstvgws asgfvaavla rlirkglell seldeaaagh lrrlegllps
       61 vwrvldaada gavdlggral qdlldaayaa ddalddvepa apgvardgag aeearlaaaa
      121 tavarkprsp lrfllcfspp rnavaaaggs gghgkssksk isgvdlhglr qaletmaqaa
      181 yrcasmyeha apqrnyatvv sgqteeteqd difgreaeve qilqdvrfge dphyrlgigv
      241 lpvaghagig ktalvrfifh hevaraefav rmwvhvsgaf rlrrqlmdqm vhavaghdrd
      301 agdarellhk eltgkrfllv ldgitdvved qrgdlmellk paarrsliiv ttqsetvata
      361 igtmpvltlg plgsddywkm fkhfafgste dteectllgd dwddveedee elspmeqias
      421 elakkmaglp lpaqaigral yfrrddedhw rnvledklwe sqdvcgispa lwlsyrhldp
      481 rlkqcfayca vfsddyvfrk eelvnmwvsq gliysdream rlediggelf delvhrcffq
      541 pigsnryvvh swmqelarav atsriftite ssgdvprdvr hltirtsnls klkkdlelqv
      601 spspdhhfly rvrtilfhad fsesddfldv lahifsmtks mrvlglscan itylppeigr
      661 lqhlrylnls gnkiidipet vcqlyhlqvl dvrsnsprlq ppngitslih lrhlyasevf
      721 lsstgdmksl snlqqldvfc vggsmhidtl rqmtqlrgkl rirdlrqvdv sevskgmlkg
      781 mqylsalqfs wsscdgqtke iskdeellec lqphdnlrsl eimgyrgvry pswmtktsgs
      841 lsnvtsmyli dcmncktlpp lhvlpslevl eirrmpsitk vsaipqrsdq esflklkrli
      901 fegalhctew ltgnsksrsm afpclcelei rscpklttfp dlplsltimi ienvglemlp
      961 riidkqpste ealeatskhg rwtsglttlr vhqchrlrsl atsllqqqhl lksleflsik
     1021 ncdnvicdip dgfkdltalr dislydcpkm lvdkfhtsvr tmeisecfvv qggwvdedpi
     1081 lfsvwnlrit gcshvrsdev skieqldwls sllnvynlhl entlilrlsm fdqlpsleil
     1141 eidgcdtffa dsfdftwler lqvlsirncr emsrlpenlc tlpvleelcv encpaiealp
     1201 englppslkr lsicncgsrl iercrddeld rpkiaiigvv yidgqcigpk
//
LOCUS       XP_034570538             554 aa            linear   PLN 25-MAY-2020
DEFINITION  putative disease resistance protein At3g14460 [Setaria viridis].
ACCESSION   XP_034570538
VERSION     XP_034570538.1
DBLINK      BioProject: PRJNA633601
DBSOURCE    REFSEQ: accession XM_034714647.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Setaria viridis
  ORGANISM  Setaria viridis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_048271.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Setaria viridis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Setaria viridis"
                     /cultivar="A10"
                     /db_xref="taxon:4556"
                     /chromosome="9"
     Protein         1..554
                     /product="putative disease resistance protein At3g14460"
                     /calculated_mol_wt=63069
     CDS             1..554
                     /gene="LOC117835285"
                     /coded_by="XM_034714647.1:1..1665"
                     /db_xref="GeneID:117835285"
ORIGIN      
        1 mdissylaig gwfiqvifdk ylsyklqrwa vncgidheld rlrvallrtq svlhgtelap
       61 tlshsslpwm relrdcmyha edlldkleyn rlhhemeess angsssspis tfmhsrfrnq
      121 gapasspepc wdrstkvkne mvnllerieq vasgvseals lprsirsnnc ntmtssiihg
      181 kiigrdfksq qlvtaltssq denpvsvvsi vgvggigkta laqhvyndtr itenfnvrmw
      241 isvtylfdel ritkemlesa sssrfrhdgt tnfnrlqval tarlaskrfl lvlddvwnnd
      301 nitiaieqen wqkllaplkg gakgskillt trsrmvaeml qssyiiclea llvndcwsli
      361 kscmfdetsh ninsqlenig rkiaetlsgl piaakvvarh lkckhsvdew kqvlqrnavw
      421 eeimpilrts ydnlpphlkq cfaycsifpr gwefeaeqli lqwiaqgfvh pdgcrrmedi
      481 gkeyindlcn ksfaiqkkef vsyyvmppvi yelakavate ecfrigddew tripssvrhl
      541 lqawkiafqn eqlg
//
LOCUS       XP_034570539             421 aa            linear   PLN 25-MAY-2020
DEFINITION  la-related protein 6C-like [Setaria viridis].
ACCESSION   XP_034570539
VERSION     XP_034570539.1
DBLINK      BioProject: PRJNA633601
DBSOURCE    REFSEQ: accession XM_034714648.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Setaria viridis
  ORGANISM  Setaria viridis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_048271.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Setaria viridis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Setaria viridis"
                     /cultivar="A10"
                     /db_xref="taxon:4556"
                     /chromosome="9"
     Protein         1..421
                     /product="la-related protein 6C-like"
                     /calculated_mol_wt=45088
     CDS             1..421
                     /gene="LOC117835286"
                     /coded_by="XM_034714648.1:1..1266"
                     /db_xref="GeneID:117835286"
ORIGIN      
        1 maqdggerss kasagsssgc stpfrfnvha refvpvspaa spmgasalaa vgyyspflql
       61 psgsgggggl gavdwnffae pdptfflpdf ghaeiagaag itghpkgasp adiahkiikq
      121 veyqfsdtnl vandfltkim nkdpegyvpl svisswkkik amgvtnqllv ralrtseklv
      181 vsddgrrvrr aqpfterhke elqsrmviae nfpddstrns lekifgvigs vknirichpq
      241 epssarssks danallvsnk lhalieyets qqaeravyrl ndgrnwrkgl rvravlrrsp
      301 ksvtrlkrld ldhlaasdee rsrdsptaaa hlpdhsqedq haagskkpwg sgrgrqhaga
      361 naapqtthst agaawhldsf aasprhapqg prmpdgtrgf nmgrgrpspa vaaaaaavrv
      421 v
//
LOCUS       XP_034570540             901 aa            linear   PLN 25-MAY-2020
DEFINITION  uncharacterized protein LOC117835287 [Setaria viridis].
ACCESSION   XP_034570540
VERSION     XP_034570540.1
DBLINK      BioProject: PRJNA633601
DBSOURCE    REFSEQ: accession XM_034714649.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Setaria viridis
  ORGANISM  Setaria viridis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_048271.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Setaria viridis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Setaria viridis"
                     /cultivar="A10"
                     /db_xref="taxon:4556"
                     /chromosome="9"
     Protein         1..901
                     /product="uncharacterized protein LOC117835287"
                     /calculated_mol_wt=98642
     CDS             1..901
                     /gene="LOC117835287"
                     /coded_by="XM_034714649.1:1..2706"
                     /db_xref="GeneID:117835287"
ORIGIN      
        1 mardvplvvq gvisatepss nlahfllpra ergrlpapps ppcnvrpirh gelqvefkgw
       61 pvapdlwkvw vdklrarhep lwrdagilha ilattcwvgr ddgtllqlaa fwsgdtntfv
      121 fpwgeatvtl edvavlaglp lrgepvckkl ygsargdvda ledvrsslcq sswnakpsha
      181 awakhfselp pedefevleh egflamwlsl fvlpvppsde vrpevlpvaa rlarggtval
      241 apaalasiya dlsalrrhvv ssgerqpfaa wapldtlqlw vwerfpelrp eeaarstppr
      301 dapravrrwh dahkvfdpry vhavlmspak fewapygssg fapppgsygr raiarrtell
      361 lfahclrace mvgmnsieqy rphrvarqlg fdqdvpgava ransnqfaaw atykiglvkf
      421 sfivpsnepa vtaeyeqwwe pcsracatav aeaarmkvsi ltqiagdvng mmpgwvrnae
      481 krstlrrgkk vsqgssgaaa tllsavdeps asvaekersk slqqqsqeea pqpvtmpdeq
      541 nseqaqvlah hlvkqtqfga ttssllkpse errpvstgnn epaaaledlt lqqepadgva
      601 avrtnagllp gpteetrtra vtvemgngei sssdpvlevd rvqkycvsdl aaalknivlq
      661 qepadplaav ttdagllqep teetrtravt vemgngeiss sdpvlehihr vselaaalkn
      721 itlqqkpadt vatvrtdadl lqeptdetrt ravtsemskr alkgkfssle gnnkgtnnnv
      781 sspnqqmeca esnkkssgng gtsssrlage ntapdstevc tktlyylrrs drtedawand
      841 anrnadffhp kqavgtmemm ekasairqae ssklretimk qmeeiralea aekqerrnlk
      901 k
//
LOCUS       XP_034570541             866 aa            linear   PLN 25-MAY-2020
DEFINITION  uncharacterized protein LOC117835288 [Setaria viridis].
ACCESSION   XP_034570541
VERSION     XP_034570541.1
DBLINK      BioProject: PRJNA633601
DBSOURCE    REFSEQ: accession XM_034714650.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Setaria viridis
  ORGANISM  Setaria viridis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_048271.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Setaria viridis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
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