KEGG   Rhizobium etli CFN 42: RHE_PF00231
Entry
RHE_PF00231       CDS       T00317                                 
Name
(GenBank) probable oligopeptide ABC transporter, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
ret  Rhizobium etli CFN 42
Pathway
ret02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ret00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHE_PF00231
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ret02000]
    RHE_PF00231
Transporters [BR:ret02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    RHE_PF00231
SSDB
Motif
Pfam: ABC_tran oligo_HPY SMC_N AAA_21 AAA_16 AAA_22 AAA_29 NACHT Sigma54_activat ATP-synt_ab ABC_ATPase DUF87 nSTAND3 AAA_7 NB-ARC AIG1
Other DBs
NCBI-ProteinID: ABC94121
UNAM_f: RE1PF0000231
RhizoBase: RHE_PF00231
UniProt: Q2JZ65
Position
p42f:complement(244523..246244)
AA seq 573 aa
MTDIVPIAGRPLLEVKNLTVEFPLRTGVFRAVSDLSFTIEPGKTLCVVGESGSGKSVTAR
SILQIVDTPGRIAGGSITLNHPKGGSIDLTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSP
IHTVGNQIIEALRLHTRMSKAEARVEAISLLKQVEIPAPEKALDRYAFQYSGGMRQRAMI
AMALACKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFITHDMGVVAQIADDV
LVMHNGVAKEYAPVEQIFHAPKDDYTRMLIGSVLKLEQKAEIRLARAPLDRAAAPILELR
NLSMDFGEVKALDDVSISLLPGETLGIVGESGSGKTTMGRSIMRLIDPTSGEILYRRADG
GIIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQIIGEPLLVNGIAKGRALDERV
CHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAITLNPRVIVADEATSALDVSVRSQVL
DLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYKGQLVEIGEAEKVCRTPEHAYTQAL
ISAIPRPDPRDRDHSRRFRYVAPDNLKNGSSQR
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgaccgacatcgtacccattgccggcaggccgcttcttgaggtgaagaacctcaccgtc
gaattcccgctgcgcaccggcgtctttcgcgccgtcagcgacctgtcctttacaatagag
ccgggcaaaacgctctgcgtggtgggtgaaagcggatccggaaagtcggtgacggcgcgc
tcgatcctgcagattgtcgacacgcccggccgtattgccggtggttcgatcacactgaac
cacccgaagggcggctcgattgatctgaccagcctcaatccgcgcgggcgacagatccgg
gcgatccgcggccgcgatatcgcgatgatcttccaggagccgatgtcgtcgctgtcgccc
atccataccgttggcaaccagatcatcgaggcgcttcgccttcacaccaggatgagcaag
gcggaggcgcgcgtcgaggccatatcgctgctcaagcaggtcgagatccccgcgccggag
aaggcgttggatcgctacgccttccaatattccggtggcatgcgccagcgcgcgatgatc
gccatggcgctcgcctgcaagccgcaactgctgatcgccgacgagccgaccacggccctc
gacgtgacgacgcaggccgagattctcgacctgattgcccgcctgcagaaggccaacggc
atggccgtccttttcataacgcatgatatgggtgtcgtggcgcagatcgccgatgacgtt
ctggtcatgcataacggtgtcgccaaggaatatgcgccggtcgagcagatctttcacgcc
ccgaaggacgattatacccgcatgttgattggctcggtgctgaagctggagcagaaggcg
gagattcgcctggcacgggcgccgctcgatcgggcggcggcgccgatcctggaattgcgt
aatctttcgatggatttcggcgaggtaaaagcactcgacgacgtctccatttcgctgctg
ccgggcgaaaccctcggcattgtcggagagagcgggtccggtaagacgacaatgggccgc
tcgatcatgcggctgatcgatccgacatcaggcgagatcctctatcgccgcgctgatggc
ggcatcatcgacctggctacggcaaaaggccagacgcttgcggccgcgcggcgcgaattg
cgtatggtgttccaggatcccttcggctccctcaatccgcgcatgaccgtctcccagatc
atcggcgaaccgctgctggtcaacggcatcgccaagggacgggcgctggacgagcgcgtc
tgccacctgatggagcaggtcggccttgatccaagggcgcgcgaacgttatccgcatgcc
ttctccggcggtcagcgccaacgtatcggcattgcccgcgccattacgctcaatccgcgc
gtcatcgtcgccgatgaggcgacttcggcgctcgacgtctcggtgcgttcgcaggtgctc
gatctcctgatgcgcctgcaggacgaactcgggctcgcctatatcttcatcagccacgac
atcggtgtcatccgctacatgtgcgaccgcgtcggcgtcatgtacaagggccaactcgtc
gaaatcggcgaggcggagaaagtctgccgcacgccggagcatgcttacacacaggcgctc
atatcggccattccgcggcccgatccacgcgaccgcgatcattcgcggcgcttccgctac
gtcgctcccgataatctgaagaacgggagctctcagcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (2)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
   UNAM_F (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

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