KEGG   Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_00530
Entry
BA173_00530       CDS       T05695                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ric  Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03420  Nucleotide excision repair
ric03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ric00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BA173_00530
   03430 Mismatch repair
    BA173_00530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ric03400]
    BA173_00530
Enzymes [BR:ric01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BA173_00530
DNA repair and recombination proteins [BR:ric03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BA173_00530
   MMR (mismatch excision repair)
    Other MMR factors
     BA173_00530
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 AAA_12 MVP_shoulder ResIII DEAD
Other DBs
NCBI-ProteinID: ASX28520
UniProt: A0A249E5D9
Position
complement(111260..113221)
AA seq 653 aa
MPNQDFLHSLNVQQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQNILAV
TFTNKAAKEMQERVHNLVSSYGLNIGTFHSMAARILRDQIEHLNLGLNSRFTIISQDDQL
RLIKDIVKLKNIDTKKYAPKLIHIVISRWKDQGLLPNKLSSSDTNLPLQRVAKLVYEEYQ
QNLLISNVVDFGDLLLYNNELFIKNPEILKYYQEKYRYILIDEYQDTNVVQYLWARMLAS
LSKNICCVGDDDQSIYGWRGAEVGNILRFEKDFLNATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDKESGEKIKIISCWNDKEEARYIASEIARLVREGRYSAGNIAILVRAG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRIALNQNDNLALERIINVPKRA
IGAVTLNKIKAYAIEKNISNFVAIKEMLEDGEIKTKSYETLKDLVTKISNWHERFSFDAP
INVTKAILDDSGYLEMLQEEKTEEALGRIENINEMLRAIAEFNDIHDFIEHSSLVMENEV
LETNYGGSVTIMTLHGAKGLEFDVVFLPGWEEGVFPSQRSLDEEGEKGLEEERRIAYVGI
TRAKKELYITHAESRKIFYEIVRSYPSRFLAEIPEEIIIRTSSIKKYDSFYKF
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgccaaatcaagacttcttacattcattaaatgtgcagcaacaaaaagcagttcttcat
accgaaggaccgcttcttttgcttgcaggggcaggaactggtaagacgaaagtactaacc
tcaagaattgcaaatattattcatcaaaatttagcatcccctcaaaatattttagctgtt
acttttacgaataaagcagcaaaagagatgcaggaaagagtccataatttggttagctct
tacggtcttaatattggtactttccactcaatggcagcaagaatattgcgtgatcaaata
gagcatttaaatctcggtttaaatagcagattcactattattagccaagatgatcaacta
agattgattaaggatatagtaaagctcaaaaatattgatactaaaaaatatgctcctaaa
ttaatacatatcgtaatctcacgttggaaagatcaaggtttattgccaaataagctttca
agctctgatactaatttaccgctgcaacgtgtagcaaaacttgtttatgaagaatatcag
caaaatttacttatctctaacgtagtggattttggggatttactactttataataatgag
cttttcattaaaaaccctgagatattaaaatattatcaagaaaaatatcgttatatttta
attgatgagtatcaagatactaatgtcgtgcaatatttgtgggcaagaatgcttgcgagc
ttaagtaaaaatatctgttgtgttggtgatgatgatcagtctatttatggttggcgtggt
gcagaagttggtaatatattacgttttgaaaaggattttttaaacgccacaattattaaa
ttggagcagaattatagatcaactctgccaattcttgcggctgcttcaaatgttattaat
aacaataaaaatcgtcatggcaaaaccttatggactgataaggaaagcggcgaaaagatc
aaaattatatcttgttggaacgataaagaggaagcaagatatattgcctccgaaatagct
aggttagtgcgagagggaagatatagtgcaggaaatattgctatattagtgcgagcaggc
tttcaaactagaagctttgaagaagcctttataaatagtgctatgccttataagattatc
ggaggtcttagattctatgaacgtatggaaataagagacgtgcttgcttatattcgtatt
gccttaaatcaaaatgataatttagcccttgagcgtattattaatgtgccgaaaagagca
ataggggcagtgactttaaataaaattaaagcatatgctatagaaaaaaatatttctaat
tttgttgctattaaagaaatgctagaggatggtgagataaaaacaaaatcctatgaaact
ttgaaagatttagttactaaaatcagcaattggcatgaaaggtttagtttcgatgctcca
ataaatgtaactaaagcaatactcgatgattctggatatttagaaatgcttcaggaagaa
aaaactgaagaagctttaggcaggattgagaatatcaacgaaatgctaagagctattgct
gagtttaacgatattcatgattttattgagcattctagcttagttatggaaaatgaagtt
ttagagaccaattatggtggttctgtaacaataatgacactacacggtgctaagggtctt
gaatttgatgtagtatttttgccaggttgggaagagggggtgtttccgtctcaaagatct
ttagatgaagagggtgaaaaaggtttggaagaagaacgccgcattgcttatgttggtatt
actagagctaaaaaagagctttatattacccatgctgaaagccgtaaaatattctacgaa
atagtcagatcatacccatcaaggttcttagctgaaataccagaggaaattattatccgc
acatcttctataaaaaaatatgattctttttacaaattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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