KEGG   Rattus norvegicus (rat): 305471
Entry
305471            CDS       T01003                                 

Gene name
Patz1, Zfp278, Znf278
Definition
(RefSeq) POZ (BTB) and AT hook containing zinc finger 1
  KO
K24383  POZ-AT hook zinc finger protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    305471 (Patz1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 BTB-ZF factors
    305471 (Patz1)
SSDB
Motif
Pfam: zf-C2H2_assoc3 BTB zf-C2H2_4 zf-C2H2 zf-H2C2_2 zf-C2H2_6 zf-C2H2_jaz zf-met zf-Di19 Zn-ribbon_8 zf-C2H2_8 ARS2 zf_C2H2_13 Zn_ribbon_SprT
Other DBs
NCBI-GeneID: 305471
NCBI-ProteinID: NP_001100701
RGD: 1308337
Ensembl: ENSRNOG00000018709
UniProt: D3ZX15
Position
14q21
AA seq 641 aa
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGAAAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAAMAANSNGIAGSMQPEEEAARATGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPNVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNREGQKCSHQDLIESSDSYGDLSDASDLKTPEKQSANGSF
SCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSP
FSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPIGPEGK
NT seq 1926 nt   +upstreamnt  +downstreamnt
atggagcgggtcaacgacgcttcttgcggtccgtcgggctgctacacctaccaggtgagc
agacacagtacggagatgctgcacaacctgaaccaacaacgcaaaaacggcgggcgcttt
tgcgacgtgctcctacgggtaggcgatgagagcttcccagcgcaccgcgctgtactggct
gcctgcagcgagtactttgagtctgtgttcagcgcccagttaggcgacggcggagctgca
gacggtggtcctgctgatgtgggaggcgcggcggcggctccaggcggcggggctggaggc
agccgcgaactggagatgcacaccatcagttccaaagtgttcggagacatcctggacttc
gcttacacgtcccgaatcgttgtgcgcctagagagcttccccgagctcatgacggccgcc
aagttcctgctgatgaggtcggtcatcgagatctgccaggaagtaatcaaacagtccaac
gtgcagatcctggtgccccctgcccgggctgatatcatgctctttcgccctcctgggact
tctgacttgggcttccctttggacatgaccaacggggcagccatggcagccaacagtaat
ggtattgctggcagtatgcagcccgaggaagaggctgccagggccacaggtgctgctatt
gcgggccaagcttccctgcctgtgttacctggggtggacagattgcccatggtggctgga
cctctatccccccaactactgacttctccattccccaatgtggcatccagtgcacctcct
ctgactggcaagcgaggccggggacgccccaggaaggccaacctgctggactccatgttt
gggtctccagggggcttgagggaagcaggcatccttccatgtggcctgtgcggtaaggtg
ttcactgacgccaaccggctccggcaacatgaggcccagcacggcgtcacaagcctccag
ttgggctatatcgatcttcctcctccaaggctgggtgagaatgggttacccatctccgag
gaccccgacggccccagaaaaaggagccggaccaggaagcaggtggcttgtgagatctgt
ggcaagatctttcgtgacgtataccatctcaaccggcataagctgtcccactctggggag
aagccgtactcgtgcccggtgtgtggtctgcggttcaagagaaaagaccgcatgtcgtac
catgtgaggtcccatgatgggtcagtgggcaaaccgtacatctgccagagctgtgggaaa
ggcttctccaggccagatcacttgaatggacatatcaagcaggtgcacacgtctgagcgc
cctcacaaatgtcagacctgcaatgcctcctttgccactcgagaccgcctgcgctcccac
ctggcctgccatgaagacaaggtgccctgccaggtgtgcggaaagtacttgcgggcagcg
tacatggctgaccacctgaagaagcacagcgaggggcccagcaacttctgcagtatctgt
aaccgagaaggccagaaatgctcacatcaggatctgattgagagctctgattcctatggt
gacctctcagacgccagtgacctgaagactccagagaaacagagtgccaacggctctttc
tcctgcgacatggcagtccctaaaaacaaaatggagtctgacggggagaagaagtaccca
tgccctgaatgtgggagcttcttccgttctaagtcctacttgaacaaacacatccagaag
gtgcatgtccgtgcccttgggggtcccttgggggacctgggccctgcccttggttcacct
ttctctccccagcagaacatgtctcttctcgagtcctttggatttcagattgttcagtca
gcgtttgcatcatctttagtggatcctgaggtggaccagcagcccatagggcctgaaggg
aagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (17)   
   RefSeq(nuc) (7)   
   GenBank (5)   
   EMBL (5)   
Protein domain (14)   
   Pfam (14)   
All databases (61)   

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