KEGG   Rattus norvegicus (rat): 399679Help
Entry
399679            CDS       T01003                                 

Gene name
Aicda, aid
Definition
(RefSeq) activation-induced cytidine deaminase
  KO
K10989  activation-induced cytidine deaminase [EC:3.5.4.38]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04672  Intestinal immune network for IgA production
rno05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    399679 (Aicda)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    399679 (Aicda)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.38  single-stranded DNA cytosine deaminase
     399679 (Aicda)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: APOBEC2 NAD1 APOBEC_N NAD2 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 RcbX DUF2599
Motif
Other DBs
NCBI-GeneID: 399679
NCBI-ProteinID: NP_001094249
RGD: 1303222
Ensembl: ENSRNOG00000015478
UniProt: G3V7Y8
Position
4q42
AA seq 198 aa AA seqDB search
MDSLLMKQKKFLYHFKNVRWAKGRHETYLCYVVKRRDSATSFSLDFGHLRNKSGCHVELL
FLRYISDWDLDPGRCYRVTWFTSWSPCYDCARHVAEFLRWNPNLSLRIFTARLYFCEDRK
AEPEGLRRLHRAGVQIGIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRLTRQLRRIL
LPLYEVDDLRDAFRILGL
NT seq 597 nt NT seq  +upstreamnt  +downstreamnt
atggacagcctcttgatgaagcaaaagaagtttctttaccacttcaaaaatgtccgctgg
gctaagggtcggcacgagacctacctgtgctatgtggtgaagaggagagatagtgccacc
tccttctcactggactttggccaccttcgcaacaagtcgggctgccacgtggaattgttg
ttcctacgctacatctcggactgggacctggaccccggccggtgttaccgtgtcacctgg
ttcacttcctggagcccctgctacgactgtgcgcggcacgtggctgagtttctgagatgg
aaccctaacctcagcctgaggattttcaccgcgcgcctctacttctgcgaagaccgcaag
gctgagcctgaggggctgcggaggctgcaccgcgccggagtccagatcgggatcatgacc
ttcaaagactatttttactgctggaatacatttgtagaaaatcatgaaagaactttcaaa
gcctgggaagggctgcatgaaaactccgtcaggctaaccagacagcttcggcgcatcctt
ttgcccttgtatgaagtcgatgacttgagagatgcgtttcgtattttgggactttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (34)   

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