KEGG   Rattus norvegicus (rat): 64573Help
Entry
64573             CDS       T01003                                 

Gene name
Trpc2, Trrp2
Definition
(RefSeq) transient receptor potential cation channel, subfamily C, member 2, pseudogene
  KO
K04965  transient receptor potential cation channel subfamily C member 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    64573 (Trpc2)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   64573 (Trpc2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Ion_trans TRP_2 PKD_channel Ank_2 gp37_C Ank
Motif
Other DBs
NCBI-GeneID: 64573
NCBI-ProteinID: XP_008758034
RGD: 628819
Ensembl: ENSRNOG00000020188
Position
1q32
AA seq 902 aa AA seqDB search
LQKVILGTQECCPLSFTQPQPNWTEIVNKKLKFPPTLLRAIQEGQLGLVQQLLESGSDPS
GAGPGGPLRNVEESEDRSWREALNLAIRLGHEVITDVLLANVKFDFRQIHEALLVAVDTN
QPAVVRRLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQL
LMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAA
FQLSRELRRLARKEPEFKPQYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSETEP
EAEGLGQAFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTIWKL
FVAFLIFLTMPFLCIGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQ
LSTFKGRSQSVWETSLHMIWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLASF
ALRLLLAGLAYMHCRDASDSSTCRYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAY
ILPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETEKLGNFNETF
QFLFWTMFGMEEHSVVDMPQFLVPEFVGRAMYGIFTIVMVIVLLNMLIAMITNSFQKIED
DADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAAFYLLRRIFRFICCGSSCCKAKKS
DYPPIPTFTNPGARAGPGEGEHVSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTEL
TKTVSRLQSEVASVQKTVAAGGALRPPDGASILSRYITRVRNSFQNLGPPAPDTPAELTM
PGIVETEVSLEDSLDATGEAGTPASGESSSSSSAHVLVHREQEAEGAGDLPLGEDLETKG
ES
NT seq 2709 nt NT seq  +upstreamnt  +downstreamnt
ttacagaaggtaatcttgggaactcaagagtgctgtcctctctccttcacccaaccacag
cccaactggactgagattgtgaacaaaaagctcaaattccccccaacactgctgcgtgct
atccaggagggccagctgggtctcgtgcagcagctgctggaatcaggctccgatccctcg
ggtgctgggccaggtggtcctctgcggaatgtggaagagtctgaggaccgctcctggagg
gaagcccttaatctggccatccgcctgggccacgaggtcatcactgatgttctgctggcc
aatgtcaagtttgacttccggcagatccacgaagccctgctagtggctgtggacacaaac
cagccagcggtagtgcgtcgtctgttagctcggctggaacgggagaaaggtcgaaaagta
gacaccaagtctttctctttagccttctttgactcatcaatcgatggctcccgctttgcc
cctggtgttactccactcacactggcctgccagaaggacctgtatgagattgcccagctg
cttatggaccagggccacactattgctcggccccacccagtttcctgtgcctgcctcgag
tgcagcaatgcgcgccgatatgacctgctgaagttctcactatcccgaatcaacacctac
cggggcattgctagcagggctcacctctcgctggccagtgaggatgccatgctggcggcc
tttcagctcagccgggagctcaggcgccttgcacggaaggagcctgagtttaagcctcag
tacattgccctggagtctctctgccaggactatggctttgagttgctgggcatgtgccgg
aatcagagtgaggtcactgcagtgctcaatgacctgggcgaggatagtgagactgagcct
gaggctgagggcctgggccaggcctttgaggagggcatccctaacctggcaagactgcgg
ttggctgtcaactacaaccagaaacagtttgtagcacaccccatctgccagcaagtgctg
tcttccatttggtgtgggaacctggctggctggcgcgggagcaccaccatctggaagctc
tttgtggccttcctcatcttcctcaccatgcccttcctctgcattggctactggctggcg
cccaagtcccggctgggccgcctgctgaagatcccagtgttgaagttcctgctccattct
gcctcctatctgtggttcctgatcttcttgctgggagagtctctggtcatggagactcag
ctgagcaccttcaaaggccgcagtcagagtgtctgggagacttctctgcatatgatttgg
gtcacaggctttctgtggtttgagtgtaaggaggtgtggatcgagggcttgcgaagctac
ctcctggactggtggaacttcctggacgtggtcatcctgtctctgtacctggcatccttt
gcactgcgcctcctcctggctggacttgcctacatgcactgccgggacgcctcagacagc
agcacctgccgatacttcaccacagctgagcgaagtgagtggcgcacagaggacccccag
ttcctggccgaggtgctctttgctgtcacgagcatgctcagtttcacccgattggcgtat
attctgccagctcacgaatcattgggcactctgcagatctccattggcaagatgattgac
gacatgatccggttcatgttcatcctcatgatcatcctgactgccttcctctgcggcctc
aacaacatctatgtgccctaccaggagacggagaagctgggcaatttcaacgaaacgttc
cagttcctcttctggaccatgtttggcatggaagagcactctgtggtggacatgccccag
ttcctggtgcctgagttcgtgggccgggccatgtacggcatctttaccatcgtcatggtg
attgtgctactcaacatgctcatcgccatgatcaccaactccttccagaagatcgaggac
gatgctgatgtagagtggaagtttgctcgctccaagctctacctgtcctacttccgagag
ggtctgacgctgcctgtgccttttaacatcctgccatccccaaaggctgccttctacctt
ctcaggaggattttccggttcatttgctgtggctcctcctgttgcaaagccaagaagtcg
gactatcccccaatcccgacctttaccaaccctggggcaagggcggggcctggggaagga
gaacatgtgtcctaccgccttcgagtcatcaaggctctggtgcagcgctacatagagact
gcccggcgcgagttcgaggagacccgtcggaaagatctgggcaacagactgacagagctg
accaagactgtgtctcgactgcaaagcgaggtggccagtgtgcagaagactgtggcagcg
ggaggggcgctgcggcctccggatggcgccagcatcctcagtcggtacatcacccgagtg
cgcaacagcttccagaacctgggcccccctgcccctgacacccccgcagagctgacgatg
cctgggattgtggagaccgaagtctccttagaagatagccttgatgctacaggagaggct
gggactccagcttctggagagtccagctcttcctcctcggcccatgtgctggtacacagg
gagcaagaagcagagggggcaggggacttgcccctgggggaagatctggagaccaagggc
gagtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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