KEGG   Runella slithyformis: Runsl_1982
Entry
Runsl_1982        CDS       T01553                                 
Name
(GenBank) Sigma 54 interacting domain protein
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
rsi  Runella slithyformis
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rsi03110]
    Runsl_1982
Chaperones and folding catalysts [BR:rsi03110]
 Heat shock proteins
  HSP100
   Runsl_1982
SSDB
Motif
Pfam: AAA_2 AAA zf-C4_ClpX ClpB_D2-small AAA_5 MCM RuvB_N AAA_22 Sigma54_activat Mg_chelatase AAA_7 AAA_24 NACHT IstB_IS21 AAA_14 TIP49 PhoH TsaE AAA_16 Torsin ATP-synt_ab PIF1 Sigma54_activ_2 Zeta_toxin nSTAND3 6PF2K RNA_helicase ResIII AAA_33 DEAD AAA_18 ABC_tran AAA_25 Parvo_NS1 AAA_19
Other DBs
NCBI-ProteinID: AEI48400
UniProt: A0A7U3ZJR4
Position
complement(2282284..2283522)
AA seq 412 aa
MAAINCSFCGRRKNEVQLLLSGIDAHICNFCIEQGYGVVQEELYPKKKKEKPSTPKFNLI
KPLEMKRFLDQYVIGQDEAKKTLSVAVYNHYKRLMQPKSNDEVYIEKTNIIMVGETGTGK
TYLARTIAKMLQVPFCIADATVVTEAGYVGEDVETILTRLLQAADYNAEAAERGIVFIDE
IDKIARKSDNPSITRDVSGEGVQQALLKLLEGSVVNVPPQGGRKHPDQKLIPINTENILF
ICGGAFDGIDRHIAKRINSRPIGFTNDRRLGEIFDKGNLLRYVAAQDLKSFGLIPELIGR
LPALTYLNPLDGDALRQILTEPKNALTKQYQKLFTMEGIKLTFDDDVLEYIVEQALSYKL
GARGLRSICEAIMTDAMFDLPSLKDVTEFTLTLDYAREKFERSSLFVLKSVA
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcagcaatcaattgttctttttgtggcagacggaaaaatgaggtccagctactgctc
tcgggtatcgacgcccacatctgtaatttttgcattgagcaaggctacggcgtagttcag
gaagaattgtatcctaaaaagaaaaaggaaaaaccctccacacccaagtttaatctcatc
aaacccctcgaaatgaagcgttttcttgaccagtacgtcattggtcaggatgaagcgaaa
aagacgctttcggtggcggtgtataatcactacaaacgtttgatgcaacccaaatcgaac
gacgaggtatacattgagaaaaccaacatcatcatggtcggggaaaccggaacggggaaa
acctacctcgcgcggaccatcgccaaaatgcttcaggtgcctttttgcattgccgacgct
accgtggtgaccgaagccggctacgtgggagaagacgtggagaccattctgacacgcctg
cttcaggcggcggattacaacgccgaagcggccgagcgcggtatcgtgttcattgatgaa
attgataaaatagcgcgcaagagcgacaacccttccatcacccgcgacgtaagcggcgag
ggcgtacagcaggcccttttgaagttgttggaaggctcggtcgtgaatgttcccccgcag
ggcgggcgcaagcacccggatcaaaaactcattccgatcaataccgaaaatattcttttc
atctgcggcggtgccttcgacggcatcgaccgacacattgccaaacgcatcaattcccgt
ccgatcggattcaccaacgaccgtcgtttgggcgagatatttgacaaaggcaacctgctg
cgctacgtggccgcgcaggacttgaaatcgtttggcttgattcctgaactcatcggtcgt
ttgccggcattgacctacctcaatccattggacggcgatgccctgcgtcagattctgacg
gagcctaaaaatgcccttaccaaacaataccagaaactgtttaccatggaaggcatcaaa
ctcacgtttgatgatgacgtactcgaatacatcgtggagcaggccctatcgtacaaactc
ggcgcgcgcggtctgcggtccatttgtgaggccatcatgaccgatgccatgtttgacctg
ccttccctgaaagatgtgacggagtttacgctcacgctggattatgcccgcgagaagttt
gaacgctcctccctgtttgtgctgaaatcagttgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (47)   

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