KEGG T01544: Rta

Ramlibacter tataouinensis: Rta_06730

Entry

Rta_06730         CDS       T01544

Symbol

uvrA2

Name

(GenBank) Candidate excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

rta Ramlibacter tataouinensis

Pathway

rta03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:rta00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Rta_06730 (uvrA2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rta03400]
    Rta_06730 (uvrA2)
DNA repair and recombination proteins [BR:rta03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Rta_06730 (uvrA2)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Rta_06730 (uvrA2)

SSDB

Motif

Other DBs

NCBI-ProteinID:

AEG91751

UniProt:

F5XWZ0

Position

700000..705747

AA seq 1915 aa
MTQGLIRIRGARQHNLKNLDLDLRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS
AYARQFLDRMDKPAVDRVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAAEL
FDRRTARRVRHDTPETIYAQLMERTREGDPRLVVTFPVELPASTTPEEVEQWLAASGFTR
VQAEREVATVTGPRKVLDVVADRFRIQGVDKARAIEAIEVALKRGAGRMAVYADASEDGH
EVWKFSTGLHCPDSDIRYADPIPSMFSFNSAVGACEACRGFGRVIGVDWGLVIPNDKLTL
RAGAVKTIQTPAWSEAQDDLMRHAEAAGIPRDTPWYKLTPEHQAWVINGTPTYKEGNWNK
QWYGMKRFFQYLESKAYKMHIRVLLSKYRSYTPCETCGGARLKPESLLWRLGSKEDADAV
LEPARRFMPVGVEWTRGQLEALPGLSLHDLMMLPIDRLQKFFARLQPHAGDHAGEGETQA
LKLLYEEITTRLRYLVDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEP
SIGLHPRDIHRITEAMKRLRDAGNTLVVVEHDPAVMLAADRMIDMGPAPGERGGQIVFDG
STDALRHADTLTGQYLGGRKQVGMGFKRAVTDATPRLVLEGASEHNLKNVSVEFPLQRLV
VVTGVSGSGKSSLVQDILAPALLRHFGRATETPGHHERLLGADHLGDVVFVDQSPIGKTA
RSNPVSYVGAWDCIREIFATAPLARQRGYTGSKFSFNSGDGRCPTCGGSGFEHVEMQFLS
DVYLRCPDCDGKRYRPEILEIAIERQAVGAVHPRAMNVADVLELTVSEAAALFANDRDVI
RALQPIVDVGLEYVKLGQPVPTLSGGESQRLKLAGFLAEAAGRRSSQALATRGTLFLFDE
PTTGLHFDDIAKLMRALRKLLDAGHSLVVIEHNLDVIRAADWLVDLGPEGGDSGGLLVAE
GSPEEVRQHPTSHTAKALREYDGTLGMASERVPDFQRPRPNPPAKGAGAIQIVNAREHNL
KSMSVDIPHNKFSVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVD
AVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKLGVQHCVKEGAEVRPQTPDS
IAAQILRRYRGQHVGLLAPLVVNRKGVYTELADWARPRGYTHLRVDGNFLPTTGFPRIDR
FKEHTIELPVCDLDVRPENEALLREKLAIALEHGKGVLHLLAPLDRLRTAFSRGVATHSD
IGTVEVFSTRRACPVCSTSYPELDPRLFSYNSKHGWCPECVGTGVKLTREQRKAFDDTVA
ADDTKGREQTFAEPEVEDVTDEACPACRGARLNGQARAVRFDGVGIDEIAALSVTDVRRW
IEKLQAQGGLSAREQGIARDLIPEIRSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLA
AQLGSNLQGVCYVLDEPTIGLHARDNQILLNALHKLGGKGNTLVVVEHDEDTIRRADHII
DIGPSAGKRGGRVIAQGTAAQVTANPESLTGRYLLHAMKHPLRPRREVTAVEADTTFLQL
RGARLHNLQDVDVDVPLRRLVVVTGVSGSGKSTLARDVLLHNVQLAVQQRATKAGRDADD
RGKRPAWAGCASLDGYQAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRRLFADTLEAKA
RGYGPGRFSFNTGASGGASGSGRCPTCEGQGVRTIAMSFLPDVKVPCESCHGARFNPETL
AVTWRGKSIGDVLQMEVDEAVGFFASMPSISHPLQLLKDVGLGYLTLGQPSPTLSGGEAQ
RIKLVTELSKVRDDITRRGQKPPHTLYVLDEPTVGLHMADVEKLIRVLHRLVDGSHSVVV
IEHDLDVIAEADWVVDLGPEGGTAGGRIVAAAPPEEVVRLATHTGRVLGPVLARS

NT seq 5748 nt +upstreamnt +downstreamnt
atgacccagggactgatccgcatccgcggtgccaggcagcacaacctcaagaacctcgac
ctcgacctgcgcaccggcgaactgacggtggtcacgggccccagcggctccggcaaatcc
agcctggtgttcgacaccctctacgccgagggccagcgccgctatgtcgagaccttctcg
gcctacgcccgccagttcctggaccgcatggacaagcccgccgtggaccgggtggagggc
gtgccgccggccatcgccatcgaccagaccaacccggtgcgctcgtcgcgctccaccgtc
ggcaccatgacggagctgaacgaccacctcaagctgctgttcgcgcgggcagcggagctg
ttcgaccgccggacggcgcggcgggtgcggcacgacacgccggagaccatctatgcgcag
ctgatggagcgcacccgggagggcgatccgcggctggtcgtgaccttcccggtggaactg
cccgccagcaccacgcccgaggaggtggagcagtggctggccgccagcggcttcacccgg
gtgcaggccgagcgcgaggtggcgacggtgacgggcccgcgcaaggtgctcgatgtcgtg
gccgaccgcttccgcatccagggggtggacaaggcgcgcgccatcgaggcgatcgaggtg
gccttgaagcgcggggcggggcgcatggccgtgtatgcggacgcgtccgaagacggccat
gaggtctggaaattctccaccggcctgcattgccccgacagcgacatccgctacgccgat
cccattccgtccatgttctcgttcaactccgcggtcggcgcctgcgaggcctgccgcggc
ttcggccgggtgatcggggtggactggggcctggtcatccccaacgacaagctcacgctg
cgcgccggcgccgtcaagaccatccagacaccggcctggtccgaggcgcaggacgacctg
atgcgccacgccgaggcggccggcatcccgcgcgacacgccctggtacaagctcacgccg
gagcaccaggcctgggtgatcaacggcacgccgacctacaaggaaggcaactggaacaag
cagtggtacggcatgaagcgcttcttccagtacctggagagcaaggcctacaagatgcac
atccgggtgctgctgtccaagtaccgcagctacacgccctgcgagacctgcggcggcgcg
cgcctcaagcccgagagcctgctgtggcgcctgggcagcaaggaggacgcagacgcggtg
ctcgagcccgcccggcggttcatgccggtgggcgtggagtggacgcgcgggcaattggag
gcgctgccgggcctgtcgctgcacgacctgatgatgctgccgatcgaccggctgcagaag
ttcttcgcgcggctgcagccgcatgcaggcgaccacgcgggggagggtgagacgcaagcc
ctcaagctcctctatgaagagatcaccacccgcctgcggtacctggtcgacgtgggcatc
ggctacctcacgctcgaccggcagagccgcacgctgtcgggcggcgaggtgcagcgcatc
aacctgaccaccgcgctgggcacctcgctggtgaacaccctgttcgtgctggacgagccc
agcatcggcctgcacccgcgcgacatccaccgcatcaccgaggcgatgaagcgcctgcgc
gacgccggcaacacgctggtggtggtggagcacgacccggccgtcatgctggcggccgac
cgcatgatcgacatgggcccggcgccgggcgagcgcggcggccagatcgtgttcgacggc
agcaccgacgcattgcggcatgccgacacgctcaccggccagtacctgggcgggcgcaag
caggtgggcatgggcttcaagcgcgcggtcaccgacgccacgccgcgcctggtgctggag
ggcgccagcgagcacaacctgaagaacgtctcggtcgagttcccgctgcagcggctggtg
gtggtgaccggcgtgtcggggtccggaaagtccagcctggtgcaggacatcctggcgcct
gcgctgctgcggcatttcggccgcgcgaccgaaacgcccggccaccatgaacggctgctg
ggcgccgaccacctgggcgacgtggtgttcgtcgaccagtcgcccatcggcaagacggcc
cgctccaacccggtgagctatgtcggcgcctgggactgcatccgcgagatattcgccacg
gcgccgctggcgcgccagcgcggctacaccggctccaagttcagcttcaactcgggcgac
gggcgctgccccacctgcggcggctcgggcttcgagcacgtggagatgcagttcctgtcc
gacgtgtacctgcgctgcccggactgcgacggcaagcgctaccggcccgagatcctggag
atcgccatcgagcgccaggccgtcggcgcggtgcacccgcgcgcgatgaacgtggccgac
gtgctggaactcaccgtcagcgaggccgccgccttgttcgccaacgaccgcgacgtgatc
cgcgcactgcagcccatcgtggatgtcggcctggagtacgtgaagctgggccagccggtg
ccgacgctgtcgggcggcgagtcgcagcgcctcaagctcgccggcttcctggccgaggcc
gcgggccggcgcagcagccaggcgctggcgaccaggggcacgctgttcctgttcgacgag
ccgaccaccggcctgcacttcgacgacatcgccaagctgatgcgcgcgttgcgcaagctg
ctggacgccgggcactcgctggtcgtcatcgagcacaacctcgacgtgatccgcgccgcc
gactggctggtggacctgggccccgagggcggcgacagcggtggcctgctggtggccgaa
ggctcgccggaggaggtcaggcagcatcccacctcgcacaccgccaaggcgctgcgcgag
tacgacggcacgctggggatggcgtcggagcgcgtgcctgacttccagcgcccccgcccc
aaccctcccgcaaagggggcgggggccatccagatcgtcaacgcgcgcgagcacaacctc
aagtcgatgtcggtcgacatcccgcacaacaagttcagcgtggtgaccggcgtgtcgggc
tcgggcaagtcgacgctggcgttcgacatcctgttcaacgaagggcagcgccgctacctg
gagtcgctcaacgcctacgcccgcagcatcgtgcagccggccggccggcccgaggtggac
gcggtgtacggcatcccgcccacggtggccatcgagcagcgcctgtcgcgcggcgggcgc
aagtccaccgtgggcaccaccaccgaggtctggcacttcctgcgcctgctgtacgtcaag
ctgggcgtgcagcactgcgtgaaggagggcgccgaggtgcggccgcagacgcccgacagc
atcgcggcgcagatcctcaggcgctaccgcggccagcacgtcggcctgctggcgccgctg
gtcgtcaaccgcaagggcgtgtacaccgagctggccgactgggcgcggccgcgcggctac
acccacctgcgggtggacggcaacttcctgccgaccacggggttcccgcgcatcgaccgc
ttcaaggagcacaccatcgagctgccggtgtgcgacctggacgtcaggcccgagaacgag
gccctgctgcgcgagaagctggccatcgccctggagcacggcaagggcgtgctgcacctg
ctggcgccgctggaccggctgcgcacggcgttcagccggggcgtggccacgcacagcgac
atcggcacggtggaggtgttctccacccgccgcgcctgcccggtgtgcagcacctcctac
cccgagctggatccgcgcctgttctcctacaacagcaagcacggctggtgccccgagtgc
gtgggcaccggcgtcaagctcacccgcgagcagcgcaaggcattcgacgacacggttgcc
gccgacgacaccaagggccgcgagcagaccttcgccgaacccgaggtggaggacgtgacc
gacgaggcctgcccggcgtgccgtggcgcccggctcaacgggcaggcgcgcgcggtccgc
ttcgacggcgtgggcatcgacgagatcgccgcgctgtcggtgaccgacgtgcgccgctgg
atcgaaaagctgcaggcgcagggcggcctgagcgcgcgcgagcagggcatcgcgcgcgac
ctgatccccgagatcaggagccggctggagttcctggaggaggtgggcctgggctacctg
acgctggaccgcggcgcgcccacgctgtcgggcggcgaggcccagcgcatccggctggcg
gcgcaactgggctccaacctgcagggcgtgtgctacgttctggacgagccgaccatcggc
ctgcatgcgcgcgacaaccagatcctgctgaacgcgctgcacaagctgggcggcaagggc
aacaccctggtggtggtggagcacgacgaggacaccatccgccgggccgaccacatcatc
gacatcggccccagcgccggcaagcgcggcggccgcgtgatcgcgcagggcacggcggcg
caggtcacggcgaacccggagtcgctcacgggccgctacctgctgcatgcgatgaagcat
cccctgcggccgcggcgggaggtgacggcggtcgaggccgacaccaccttcctccagctg
cgcggcgctcgcctgcacaacctgcaggacgtggacgtcgatgtcccgctgcgccgcctg
gtcgtcgtcaccggcgtgtccggttccggcaagtccaccctggcgcgcgacgtgctgctg
cacaacgtgcagctggccgtgcagcagcgcgccaccaaggccgggcgcgacgccgacgac
aggggcaagcggcccgcctgggccggctgcgcctcgctggacggctaccaggccgtcgac
cgcgtgctggaggtcgaccagacgcccatcggcaagacgccccgctcctgcccggccacc
tacatcggcttctgggacaccatccgccggctgttcgccgacacgctggaggccaaggcg
cgcggctacgggccgggccggttctcgttcaacaccggagcatcaggaggagcctccggc
tcgggccgctgcccgacctgcgaaggccagggcgttcgcaccatcgcgatgagcttcctg
cccgacgtgaaggtgccctgcgagtcctgccacggcgcgcgcttcaacccggagacgctg
gcggtcacctggcgcggcaagagcataggcgacgtgctgcagatggaggtggacgaggcg
gtcgggttcttcgcctccatgcccagcatcagccacccgctgcagctgctcaaggacgtg
ggcctgggctacctgacgctgggccagccctcgcccacgctgtcgggcggcgaggcgcag
cggatcaagctggtgaccgagctgtccaaggtgcgcgacgacatcacgcgccgcgggcag
aagcccccgcacacgctgtacgtgctggacgagcccacggtcggcctgcacatggccgac
gtggaaaagctgatccgcgtgctgcaccgcctggtcgacggcagccacagcgtggtggtg
atcgagcacgacctcgacgtcatcgccgaggccgactgggtggtggacctggggccggaa
ggcgggaccgccggcgggcgcatcgtggcggccgccccgcccgaggaggtggtgcgtctg
gccacccataccggccgcgtgctcgggcccgtgctcgcgcgcagctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (60)   

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