KEGG   Salmonella bongori N268-08: A464_4124
Entry
A464_4124         CDS       T02733                                 
Name
(GenBank) Helicase PriA essential fororiC/DnaA-independent DNA replication
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
sbz  Salmonella bongori N268-08
Pathway
sbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A464_4124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbz03400]
    A464_4124
Enzymes [BR:sbz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A464_4124
DNA repair and recombination proteins [BR:sbz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A464_4124
SSDB
Motif
Pfam: PriA_3primeBD PriA-like_WH DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 AAA_19 zinc-ribbons_6 AAA_22 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AGR61307
UniProt: S5NM17
Position
complement(4121868..4124066)
AA seq 732 aa
MSVAHVALPVPLPRTFDYRLPDGWDVKAGCRVRVPFGKQQERVGIVVSVSDHSELPLNEL
KSVIEILDNEPVFSPSVWRLLLWATEYYHHPIGDVLFHALPILLRQGKPASNAPLWYWFA
TEEGLALDINSLKRSPRQQQALAALRQGKIWRYQVAECDFTDATLQTLRRKGLCELASET
PAFTDWREHYAVAGERLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLEN
ILAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQRKYRLLRLTRRAGNAQPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHHAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLHKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNLI
QASPLADDKLWLLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIISGTLVLINTLPEARK
VKWVLDVDPIEG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattaccggctg
ccggatggctgggacgtcaaagccgggtgccgcgtacgcgtgccgttcggcaagcagcaa
gagcgtgtgggcattgtcgtctcagtcagcgaccacagcgaattaccgcttaatgaatta
aagtcggtcattgaaattctggataacgaaccggtcttttccccctccgtctggcgttta
ctcctctgggcgacggagtactaccaccatcctatcggcgacgttctgtttcacgcccta
ccgattttattacgccaggggaaaccggccagcaacgcgcccctttggtactggtttgct
accgaagaggggctggcgctcgatattaacagtctgaaacgttcgccaaggcaacagcag
gcgctggcggcgctacggcaaggcaagatttggcgctatcaagtggctgaatgcgatttt
accgacgccacactgcaaacgctgcgacggaaagggctttgtgagctcgccagtgaaaca
cctgcgtttaccgactggcgagagcattatgccgtcgcaggggagcggctgcggctcaat
accgagcaggcgacggcggtcggcgcgattcacagcgcatcagatagcttctccgcctgg
ctgctggcaggcgtcacaggttccggtaagacagaagtgtatctgagcgtgctggaaaac
atcctcgcacagggtaaacaagcgttggtgatggtgccggaaatcggcctgacgccgcaa
acaatcgcccgttttcgcgaacgttttaacgcgccggtggaagtgctgcattccgggcta
aatgatagtgagcgtctttcggcatggctgaaagcaaaaaacggcgaagcggccattgtc
attggcacacgttcctcgctctttacgccgtttaagaatcttggcgtcattgtcatcgat
gaagagcacgacagttcttataaacagcaggaagggtggcgctaccatgcccgcgatttg
gcggtgtatcgcgcccatagtgaacaaattccaattattctcggctccgccacgccagct
ctggaaacgctctgcaacgtacggcaaagaaaatatcggctgctgcgtctgacgcgacgc
gcgggcaacgctcaaccagccctgcagcatgtgctggatttaaaaggccagcgtctccag
gccggactcgcccccgcccttatcgcccgtatgcgccaacatctccaggctgacaatcag
gtgattttatttctgaaccgccggggattcgcgcccgcgctgctgtgtcacgattgcggc
tggattgcggagtgtccgcgctgcgatcattactatacgctgcaccatgcgcagcatcat
ctgcgctgccaccactgcgatagccagcgtcccgtgccgcgccagtgcccctcctgcggt
tccacgcatatgctaccggttgggttagggacggaacaactggaacaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgatactaccagtcgcaaaggcgcg
ctggagcagcatttagcggaggttcaccgtggcggagcgcgcatcctgataggcacgcaa
atgctggcgaaaggccatcatttcccggacgtcactctggtggcgttactggacgtcgat
ggcgcgcttttttccgccgattttcgttcagcggaacgttttgcccagctctacactcag
gtttcaggacgcgccgggcgcgcgggtaaacaaggtgaagtggtgctacaaacgcatcat
cctgagcatcccctgctgcaaacgttactgcataaaggctatgatgcatttgcggaacag
gcgctggcggaacggcaaacgcttcaactcccaccatggaccagccacgtcattatacgc
gcagaggatcataataatcagcaggcgccggtcttcctccagcaactgcgtaacttgatt
caggccagcccgctagcagacgataaactatggttattaggtccagttccggccctcgcg
ccaaaacgtggtggtcgctatcgctggcaaatattactgcagcatccttcgcggattcgc
ctgcaacacatcatcagcggcacgctggtgttgattaatacgcttcctgaggcacgaaaa
gttaagtgggttcttgacgtcgatccaattgagggatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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