KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_00730
Entry
IA1_00730         CDS       T02868                                 
Name
(GenBank) hypothetical protein
  KO
K02504  protein transport protein HofB
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:sene00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sene02044]
    IA1_00730
Secretion system [BR:sene02044]
 Type II secretion system
  Type IVa pilus homolog protein
   IA1_00730
SSDB
Motif
Pfam: T2SSE MshEN AAA_30 AAA_16 AAA_22 AAA_11 AAA_7 AAA_29 AAA_14 ResIII DEAD BAGE Sigma54_activ_2 Kinesin nSTAND3 AAA_19 AAA_23 cobW
Other DBs
NCBI-ProteinID: AGX09462
Position
complement(168156..169541)
AA seq 461 aa
MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQME
NHRYKPDQAPSTNAAKGGETAAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLH
ILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDLTGDSISFRIATLPCKEGEKV
VLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN
TPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAE
IAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQ
RLNDPVVLSPNLWPSALPRWQASGCQHCYHGFYGRTALFEVLTVTPALRQLIASGASAQA
LEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaaagacgctcagctcaacaccttgtgtcaacgtcatcaggctgtactgatcaatagc
gccagcaacagtatcactgttgcggtggtcgacgcgccctctcatgcgttactggacgct
ctgcatttcgccacgcaaaaacagattgatattgtgtgctggactcgccagcaaatggaa
aatcatcggtataagccggatcaggctccctcgacaaacgctgcgaaaggtggagaaacc
gcggcccagcttctcaatcagacattacgctcggcgatggcgaaacgcgcctctgatatc
catctcgaacccggcgccagccgctaccgaataagactccgcatcgacggcgttcttcac
attctgcaggacatcgccaaagagacggggcttgcgctgacggccagattgaaagtcctg
ggaaatttggacatcgctgaacatcggctgccgcaggacgggcaatttaccgttgacctg
acgggcgacagcatctcttttcgtatcgccacgcttccctgtaaagaaggcgaaaaagtc
gtcttacggttgttgcatcaggttgaacaaacgctggatctggacacgctgggcatgtac
ggggcacaacttaccgcttttagacaagccctacagcaacctcaggggctggtactggtg
actggccccaccggtagcggaaaaacggtcacgctatacagcgcgctacaaacccggaat
acgccgggtatcaacctctgtagcgttgaggatccgatagaaattccactggatgggatt
aaccagacgcagatccatccccgcgccgggctcacctttcaaaatgtgctgcgcgcgctt
ttacgccaggaccctgacatcatcatggtaggtgaaattcgtgacggcgacaccgcagaa
atcgccattaaggcggcacaaacgggccatctggtactttcaacgctccatacgaactcc
accagcgaaaccctgatacgtttgcagcaaatgggcgtagcacgctggatgatctcatcg
gcgcttacgctggtggtagcgcaacgcctggtaaggaagctttgcccgcactgcaaacag
cgcctgaacgatcccgtagtgctatcgcccaatctttggcccagcgcgctaccgcgctgg
caggcaagcggctgtcagcattgctaccacggcttttatggccgaaccgcgttattcgaa
gtgttaaccgttaccccggcattacgtcagttaattgcgagcggcgcatcggcgcaagca
ctggaagcccacctccaacagaccggtacagggacgctttttgaaaatggctgtcgcgcc
gttgaacaaggcatgacgtcctttgaagagatactgcgcgttctgggaatgccccatgag
cgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (24)   

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