KEGG   Sarcophilus harrisii (Tasmanian devil): 100927264
Entry
100927264         CDS       T02286                                 
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
  KO
K09096  hypoxia-inducible factor 3 alpha
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shr03000]
    100927264 (HIF3A)
Transcription factors [BR:shr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    100927264 (HIF3A)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1 PAS PAS_4 PAS_9 HLH PAS_2
Other DBs
NCBI-GeneID: 100927264
NCBI-ProteinID: XP_031819704
Position
3:592386386..592408279
AA seq 780 aa
MFHSSSPALLSDTPRIQSPSSRGAGTSGATNSSAGGALGAGLGRGRLGPQEGRGGEERGR
GPGRSFCSGGGGSGGGGGGGGVVVAAAAAMDRGLQRSRSNTELRKEKSRDAARSRRSQET
EVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHRLCAAGDWSEVSAAGAGSGEPLDA
CYLKALDGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGHSVFDFVHPCDQEELQDVLTP
RQGLSKKKMEAPTERSFSLRMKSTLTSRGRTLNLKAATWKVLHCTGHMRAYSPPSESSAG
GAPGPEPPLRCLVLICEAIPHPSSLEPPLGRGAFLSRHTLDMKFTYCDERISEVAGYCPD
DLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVISGGR
GPQPESVVCVHFVLSRVEETGVVLSLEQTEQPTRRPPRPAERGPPSEKSPQGPGDGFDTP
GPRILAFLKPPALSEATLAADPRRFCSPDLRRLLAPILDGAAPAPAAAAPVTAAAAVPSG
PSAKERPRSPPPADLPNDLLLEMENVHKMFGFGKTLEAVETLDVEQDIEALELEMLAPYI
SMDDDFQLNTSDQPSRAFRRRPGATPRPRARSFHGLSPRPPETLPLLRWGSDPRLSQRTC
PTEGDSTDTSSQAGARKRALPQSLEEDSGTEALGVKPPKRSPSPTTDHFLLPPLSLSFLL
SGESTPGTQSDPDTRLLDLEEPMALGSSSLLSFYEDEDTAQPRGHFQLEETLSQELTPGT
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgttccattcctcctcccccgcactcttgagtgacactccgcgtatccaatctccgagc
tctaggggggccgggaccagtggggcgaccaatagttcggcggggggcgcattaggggcg
ggactggggagggggcgcctgggaccgcaggaggggaggggaggggaggagagggggcgg
ggcccgggccgcagcttctgcagtggcggcggcggcagcggcggcggaggcggcggaggc
ggtgtggtggtggcggcggcggcagccatggatcgggggctgcagagatccaggtccaac
acagaacttcggaaggagaagtctcgagatgcagcccggagccgccggagccaggagact
gaggtgctctaccagctggcccacactctgccctttgctcggggggtcagcgcccatctg
gacaaggcttccatcatgcgcctcaccatcagctaccttcgaatgcaccgtctgtgtgca
gcaggggactggagtgaagtttcagcagcgggtgcggggtctggggagccactggatgcg
tgctacctgaaggccctggacggctttgtcatggtgctgacggccgagggggacatggcc
tatctgtctgagaatgtcagcaagcacttggggctgagccagctggagcttatcggacac
agcgtcttcgattttgtccatccctgtgaccaagaggaacttcaagatgtcttgaccccc
cgacagggcctgtccaagaaaaaaatggaggctcccacggagcggagcttctccctccgc
atgaagagcacactcaccagccgggggcggaccctcaacctcaaagctgctacctggaag
gttctgcactgtacggggcacatgcgtgcctactccccaccttcggagtcctctgcgggt
ggggcgcccgggcccgagccacccctgcgctgcctggttctgatctgcgaggccatcccc
caccccagcagcctggagccacccctgggccgaggggccttcctcagccgccacaccctg
gacatgaagtttacctactgtgatgagaggatctccgaggtggccggatactgcccggac
gatctgattggctgctcggcctacgagtacatccatgccctggattctgatgccgtcagc
aagagcatccacaccctgctcagcaagggccaggccgtgaccgggcagtaccgcttcctg
gcccgcaatggaggctacctctggacccagacccaggccacggtgatctcagggggccga
gggccccagcccgagagcgtcgtctgtgtccacttcgtgctgagccgggtggaggagact
ggggtggttctgtccctggagcagacggagcagcccacgcgccggccccctcgccccgct
gaacgggggcccccctcggagaagagcccccagggccccggagacggctttgatacccca
ggccccaggatccttgccttcctgaagcccccagctctgagcgaggctactctggctgct
gaccctcgccgcttctgcagcccagaccttcgccgcctcctggcccccatcctggatggg
gccgcccccgcccctgccgccgccgcccctgtcactgccgccgccgccgtccccagcgga
ccctccgccaaagagcgtcctcgaagccctccgccggccgatctcccaaatgacctcctt
ctggaaatggagaacgtacacaaaatgtttggatttgggaagaccctggaagcggtggaa
actctggatgtagagcaggacatcgaggcactggagttagagatgctggccccctacatc
tccatggatgatgacttccagctcaataccagcgatcagccctccagggcctttcggcgg
cgtccaggagccaccccacgccctcgcgcccgcagtttccatggcctgtctccccgaccc
ccggaaactcttcctttgctccggtggggcagcgacccccggctgagccagaggacctgc
cccacagaaggggactccacagacacaagctcccaggcgggagctcggaagagggccctg
ccccagagcttggaggaagacagcgggacggaggccctgggagtgaagccccccaagcgt
tcccccagcccgacgactgaccacttcctgctgccacccctcagcctgagttttctccta
agtggtgagagcacccctgggacccaatcggatcctgataccaggctcctggacctcgaa
gagcccatggccctaggctcctcctccctgctctctttctacgaggatgaagatacggct
cagcccaggggtcacttccagctggaggagaccttgtctcaggagctcacccctggcacc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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