KEGG   Sugiyamaella lignohabitans: AWJ20_678
Entry
AWJ20_678         CDS       T05270                                 
Symbol
RIX7
Name
(RefSeq) putative AAA family ATPase RIX7
  KO
K14571  ribosome biogenesis ATPase
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AWJ20_678 (RIX7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slb03009]
    AWJ20_678 (RIX7)
Ribosome biogenesis [BR:slb03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    AWJ20_678 (RIX7)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_22 AAA_5 AAA_14 RNA_helicase AAA_33 AAA_2 AAA_28 nSTAND3 TIP49 Mg_chelatase IstB_IS21 AAA_18 AAA_3 NACHT NB-ARC Cytidylate_kin2 AAA_17 Zeta_toxin AAA_7 TsaE Rad17 ABC_tran AAA_19 Parvo_NS1 Sigma54_activat Sigma54_activ_2 Viral_helicase1 ATPase DUF815 Vps4_C DUF5906 Oxidored_nitro
Other DBs
NCBI-GeneID: 30037736
NCBI-ProteinID: XP_018734902
UniProt: A0A167D395
Position
A:complement(2153777..2156476)
AA seq 899 aa
MRPRPRKNPGSANSSLDKTVYRLVKEYLEEQALDDARKKGQLELTGEDDEEDNEDDDSLL
AKREAELNLLLNLRKLRVTEAIDICQRAELSLRRVKRVALEESVGKAFELIRKEEREKQA
ALKEEQQLDSDFEGVDIDSLMDVKDTNQMNKNVINLWDIPPAEPIARIARLKTGEEDESK
SVSKGDGVNELGSKLAASSLPGSGTATPVVATSRSDLPPEKKKAKKESDKKRKDKIDRRP
AINISLSDIGGVDRVIKQLLEMVAWPLSHPEVYTEIGSDIPRGVLLHGPPGCGKTMLANA
LANDLGVAFINVSAPSVVSGMSGESEKKLREIFDEAKTLAPCLLFIDEIDAITPKRESAQ
REMERRIVAQLLTCMDDVSMEKTGGKPVMIIGATNRPDAIDSALRRGGRFDREICMSVPD
QEARQKILETMSRKLKLQGGENFNFKRLAKLTPGYVGADLNALVTAAGACAIKRVLSKLP
GEQSKEDDIKTSLDTVAETNTVVNDMEVDDVEEQRLEVTANGSHMEPDSVDSSTGQIDIT
ITQVSDEQANPPVTTEVTISNTASTTSIPPNEIKSFLTAHPDPLTPEQLSEVAITFEDFL
TALPSVQPSSKREGFTTVPDVTWDDVGAMSTIREELEYSIVESIKNPELYAAAGIRAPSG
VLLWGPPGCGKTLLAKAVANESQANFISVRGPELLNKYVGESERAVRQVFVRARASEPCV
IFFDELDALVPRRDDSNSESSSRVVNTLLTELDGVGDRKGVYVIAATNRPDMIDSAMLRP
GRLDKQLYVELPTADERVEILKTVTRTTPTHEDVDLAIIGHDERCRNFSGADLANLTREA
AGLALRTVIQARKKLGNFEDGPADVRVTAAHFEEAFSKVRASVSDSERAKYSRMKQRSA
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagaccaagacctcggaaaaatcccgggtctgccaactcgtctcttgataagaccgtt
taccgactggtgaaggaatatctcgaggaacaggctttggatgacgctagaaagaagggt
caactggagttgacaggcgaagatgatgaagaagacaatgaagatgatgatagcttgtta
gctaaacgagaagctgaacttaatttattgctcaacttgaggaagttgcgtgttactgaa
gctattgatatttgtcagagggccgaattgagccttcgccgtgttaagagagtagcttta
gaagaatccgtaggaaaggcttttgaattgattcgaaaagaagagagagagaaacaagct
gctcttaaagaagaacaacagcttgatagtgattttgaaggtgttgatatcgattctctt
atggacgttaaagataccaaccagatgaacaaaaacgtaatcaacttatgggacattcct
ccagcagaaccaatagctagaattgcccgcttgaagactggtgaagaagatgaatcaaaa
tcagtctcaaaaggagatggtgtgaatgagcttggttccaagctggctgctagttctctt
cctggaagtggaacagcaactccagtagtagctacttcacgctctgaccttcctcctgaa
aagaagaaagccaaaaaggagagtgataagaagcgtaaagataagatcgaccgccgtcca
gcaatcaatatctcactgtcggatattggtggtgtggacagagtaatcaagcagctgttg
gaaatggtagcttggccattatcacaccctgaagtgtatactgagattggatctgatatt
cctcgtggtgtccttcttcatggacctcctggctgtggtaagacaatgctcgctaacgca
ttggctaatgatcttggggtagcttttatcaatgtgtctgctccatctgtggtttcgggc
atgtcaggtgagtcagaaaagaagctgcgagagattttcgatgaagccaaaactttggct
ccatgtttactatttattgatgaaattgatgccattacacctaaacgtgaaagtgctcaa
agagaaatggaaaggcgaattgttgctcagctgctcacctgtatggacgatgtttcaatg
gagaagactggtggaaagcctgttatgattattggcgctacaaatcgacccgatgctatt
gactcggctctacgacgtggtggacggtttgatcgtgagatttgcatgagtgttcctgac
caggaagcaagacaaaagattttggaaaccatgtccagaaagttgaagcttcaaggagga
gaaaacttcaatttcaaacgtcttgctaaactcacccctggttatgttggtgctgacttg
aatgccctggtgactgctgctggtgcatgtgctattaagagagttttgagcaagcttcca
ggagaacaatcaaaagaagacgatattaagactagtttggatactgttgctgaaactaat
accgttgtcaatgatatggaagtggatgatgtcgaagagcagagactagaagttactgca
aatggatctcatatggaacctgactcagttgacagtagcactggtcaaattgatatcacc
attactcaagtttcagatgagcaagctaaccctcctgtaactaccgaggtaacaattagc
aatactgcatctaccacttcaattcctccaaacgaaattaaatcatttttaactgcacac
cctgatcccctgactcctgaacaactttctgaagtagctatcacttttgaagatttcctt
acagctcttccatctgttcaaccatcttccaagcgtgaaggttttaccacagttccagat
gtcacttgggatgacgtcggtgccatgagcaccattcgtgaggagcttgaatactctatc
gtggaatcgattaaaaatcctgaactgtatgctgctgctggtatccgggcaccatcaggc
gttttgctttggggaccaccaggttgtggtaagactcttcttgccaaggctgttgcaaat
gaatcacaagccaactttatctcggttcgtggtcctgaactcctcaacaaatatgtgggt
gagtccgaaagagcagttcgacaagtattcgttcgagcaagagcttccgagccatgtgtg
atctttttcgacgagctggatgcacttgtaccccgccgtgacgattcgaactcagaatcc
tcatcacgtgtagtcaacaccctccttactgaacttgacggtgtcggagaccgcaaaggc
gtttatgtcattgctgcaacgaatagaccagatatgattgatagtgccatgctccgtcct
ggtcgtctcgataaacagctttatgtcgaacttccgactgccgatgagcgagtagaaatc
ctcaagactgttaccagaacgactcctacacacgaagacgtcgatctcgcaattattggt
catgatgagcgatgccgaaacttctcgggtgccgacttggccaatcttactcgagaagct
gctggtctggcccttcgtactgtcattcaggcacgtaaaaagttagggaacttcgaagac
ggtccagccgatgtccgtgtaaccgctgctcattttgaagaagccttttcgaaagtccgt
gccagtgtgtcggactcggaacgggcaaaatattcacgcatgaaacagcgttcggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (36)   
   Pfam (36)   
All databases (57)   

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