KEGG   Spirosoma linguale: Slin_3279
Entry
Slin_3279         CDS       T01156                                 
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
sli  Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:sli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sli03016]
    Slin_3279
Transfer RNA biogenesis [BR:sli03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Slin_3279
 Prokaryotic type
   Methyltransferases
    Slin_3279
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase MMR_HSR1_Xtn cobW Arf Ras GTP_EFTU Roc ABC_ATPase AAA_16 ABC_tran Guanylate_kin AAA_33 AIG1 AAA_28 AAA_29 SRPRB AAA_15 NPV_P10 AAA_18 AAA_22 AAA_21 GCV_T AAA_23
Other DBs
NCBI-GeneID: 8727032
NCBI-ProteinID: ADB39290
UniProt: D2QNA1
Position
3961281..3962657
AA seq 458 aa
MYQLEPIAALATAPGIGAIAVVRVSGEGAIELTNRLFRGKDLTQQTSHTAHFGTLRNEDG
SIIDEVLATVFRAPKSFTKEDVVEISCHGSEFIIQQILRRLMQEGVRLARPGEFTQRAFL
NGQFDLVQAEAVADLIASDSDASHRAALTQLRGGFSKQLKELRQQLIDFVALVELELDFG
EEDVEFAHRDRLRQLMLDIRRVLHPLIESFSTGNAIKNGVPTVIVGKPNAGKSTLLNALL
NEEKAIVSDIPGTTRDVIEDELFIDGIRFRLIDTAGLRQATDRIEAIGIERTQQKMRDAS
LVVYLFDAKNVKADELQTAVDEVRASRKPYLLVGNKLDAITDTTRESLETMLGESVVWIS
AANQTHLDELKAALSARVRTDAAVQTGSAVVTNSRHYNHLTGTDEALARAIHGLDTSVTP
DWLAMDLRVALQHLGELTGEITTDDLLDSIFSKFCIGK
NT seq 1377 nt   +upstreamnt  +downstreamnt
ttgtatcaattagaacctattgcggcccttgctacagcccctggcatcggtgccattgcc
gtggtccgcgtatcgggcgaaggcgctatcgaactaaccaaccggctgttccgggggaaa
gacctgacacagcaaacgagccatactgcccatttcggcacccttcggaacgaagatggc
agcatcattgatgaagtactggccaccgtttttcgggcaccgaaatctttcacgaaagaa
gatgttgttgagatttcgtgccacggctcggagttcattatccagcagattctgcgtcgg
ctcatgcaggaaggcgtccgattggccaggccgggtgagttcacccaacgggcgtttctg
aacggccagttcgaccttgtacaagccgaagccgtggccgacctgattgcgtcggattcg
gacgccagccaccgggccgctctcacccagttgcggggtggtttctcgaaacagctcaag
gaactccgccagcaactcattgactttgtcgcactggtcgagctggaactggattttggt
gaagaagacgtcgaattcgcccaccgcgaccggctacgtcagctcatgctcgatatccgc
cgggtgcttcacccattaattgaatcgttctcaacaggaaacgccattaaaaacggtgta
ccgacggttattgtcggcaagcccaacgcgggcaagtcgacgttgctcaatgcgctactg
aatgaagagaaagccatcgtttccgacatccccggcaccacccgcgatgttatcgaagac
gaactattcattgatggcatccgcttccggctcatcgacacggccgggttacggcaggct
accgaccgcatcgaagctatcggcattgagcgcacccagcagaagatgcgggatgcgtcg
ctggttgtttatctgttcgatgcgaagaatgtgaaagctgacgaactgcaaacagccgtt
gatgaggtacgggcatcgcgtaagccgtatctgcttgttggtaataaactcgatgccatt
accgataccacccgcgagtcgctggaaacgatgttaggtgaatctgtcgtctggatttcg
gcggctaaccaaacgcatctcgacgagcttaaagcggctctttcagcccgtgtccgcacc
gatgccgccgtgcaaacgggcagtgccgtggtgaccaacagccgccactacaaccacctc
accggcaccgacgaagccctcgctcgcgccattcacggcctcgacaccagcgtcaccccc
gactggctggcgatggacttacgggtagccctgcaacatctgggtgagcttaccggagag
atcacaacggacgatctgctggattcaattttcagcaagttctgtatcggaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (50)   

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