KEGG   Solanum lycopersicum (tomato): 101258139
Entry
101258139         CDS       T02665                                 
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like isoform X1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sly04812]
    101258139
Enzymes [BR:sly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     101258139
Cytoskeleton proteins [BR:sly04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101258139
SSDB
Motif
Pfam: AAA Vps4_C AAA_lid_3 RuvB_N AAA_16 TIP49 AAA_5 Mg_chelatase AAA_33 AAA_14 PhoH AAA_18 EF-hand_7 IstB_IS21 EF-hand_1 AAA_7 EF-hand_6 RNA_helicase AAA_28 nSTAND3 AAA_22 AAA_3 AAA_17 TFIIA
Other DBs
NCBI-GeneID: 101258139
NCBI-ProteinID: XP_019066956
Position
12:complement(55111339..55115997)
AA seq 562 aa
MMKKQKLENYQMVGVDAAKSKEEKMKIIFDKFDVNKDSHLGITELLGWIMAVEPTLSNDL
QRLPFLLQIYLGNPSFLAGSKGLSYSGFTNIYEEGHRNIDHDFNTINIQPPIHQGYVVRG
ILQQQQQRSLMLQSQLQQQQQYQQQEQHRSWMLQSQLVQQQAQQRASLATNTFSNNHRNT
TQQVGGGISSAGPVSNIGITAQQMGRVISSAVQVNSYGNTMQQVGGNLNSADEVNKNVNP
AEQENAVKDVKSKVKYDGSHPKLAARLEKEILDTNPGVKWDDVAGLSEAKRILQETVVLP
LFMPEYFQGIRRPSRGVLMFGPPGTGKTLLAKAVATECGMTFMNISCSSLCGNWYGESER
LTRCLFELARAHAPTMIFIDEIDSLCSVRGSATKHETSRRLKSELLVQIDGLNNSNSTSG
KMVTLLAATNFPGNLDEALRRRLEKRIYIPLPDFETRKELIQINLKLIELAPEVDIEQVA
QKTEGYSGDDLTNICRDASLNGMRQKIAGKTIDESKNILKSEILKIPVTMEDFLEAVDKI
KPTVSSGDIQRHQKWYSEFGSS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgatgaaaaaacagaagctcgaaaactatcagatggtgggtgtggatgctgcaaagagt
aaagaggagaagatgaagataattttcgacaagtttgatgtcaacaaagattcacattta
gggataacagagttgttaggatggatcatggcagttgaacccacattaagtaacgatttg
caaaggcttccatttctccttcaaatatacttgggtaacccttctttcctagctggttca
aaaggactatcctatagtggtttcactaacatttacgaagaaggtcatcgtaacattgat
catgacttcaataccataaatattcagcccccaattcaccagggatatgtcgttcgaggt
attttacaacaacaacaacaacgtagcttgatgcttcaatcacaactacaacaacaacaa
caataccaacaacaagaacaacaccgtagttggatgcttcaatcacaattagtacaacaa
caagcacaacaacgtgcaagtctagcaacgaatactttttcaaacaaccacagaaacaca
acgcaacaagtgggtggagggattagctctgctgggccggtgtctaatattgggatcaca
gcacaacaaatgggaagagtgatcagctctgctgtgcaagtgaatagttatggaaacaca
atgcaacaagtgggaggaaatctcaactctgctgatgaggtgaacaaaaacgtaaaccca
gctgaacaagagaatgctgtaaaggacgtcaagtcaaaagtaaagtacgatggatctcat
cccaaattggctgctaggcttgaaaaggaaatattggacacaaatccaggggttaaatgg
gatgatgttgctggactaagtgaggcaaagaggattctacaggaaacggtggtactccca
ctgtttatgcctgagtatttccagggaatcaggagaccttcgagaggagttcttatgttt
ggtcctcctggcacagggaaaacactcttggccaaagctgttgctacagagtgtgggatg
acatttatgaatatttcctgtagttcattgtgtggaaattggtatggagagagtgaacga
ttgacacggtgcttatttgagcttgcccgtgctcatgctccaactatgattttcattgat
gagattgattctctttgcagtgtcagagggtctgctacaaagcatgaaacatcccgaagg
ttaaagtctgaacttttagttcagatcgatggattaaataactctaatagtacatcaggt
aaaatggtgacacttttggcagcaacaaatttccctgggaatcttgacgaggcactaagg
aggaggctagaaaagcggatttacatcccacttcctgattttgagacccgtaaggagctt
atacagataaacttaaaattaatcgagttggctcctgaggtggatattgagcaagtggca
caaaaaacagaaggctacagtggagatgatctaacaaacatctgcagagacgcttccttg
aatggcatgaggcagaagatagctgggaaaaccatagacgagagcaagaacatattgaaa
tcagaaatactgaaaattccagttacaatggaagacttcctagaagctgtagataaaata
aagcccacagtttcttcaggggacattcaacgacatcagaaatggtactcagagtttgga
tcatcatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (24)   
   Pfam (24)   
All databases (42)   

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