KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr2199
Entry
C770_GR4Chr2199   CDS       T02405                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
smeg03420  Nucleotide excision repair
smeg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C770_GR4Chr2199
   03430 Mismatch repair
    C770_GR4Chr2199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeg03400]
    C770_GR4Chr2199
Enzymes [BR:smeg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C770_GR4Chr2199
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C770_GR4Chr2199
   MMR (mismatch excision repair)
    Other MMR factors
     C770_GR4Chr2199
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 PcrA_UvrD_tudor AAA_11 DEAD
Other DBs
NCBI-ProteinID: AGA07125
Position
2282163..2284736
AA seq 857 aa
MTKGFDDIPFFDEEPAPRKPAAADGGIAARAMAARDKAQRPDYVSGLNPEQREAVEALEG
PVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGHAVE
GMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQF
AGMIDTWKNKGLDPSQIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLLLHPIRMF
RANPDVLKEYHAKFRYILVDEYQDTNTAQYMWLRLLAQQTQASRNRPSSGLPATFSPSDG
EKGQAARSQSPLSPSERGEGRGEGQPTVNICCVGDDDQSIYGWRGAEVDNILRFEKDFPG
AKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLFTERTNPDDEKVHVHAAWDSEEEAR
AIGEEIEQLQRKKHNLNDISILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDA
MAYFRLVCQPADDLAFERIVNTPKRGLGETTVRTLHDYARARDIPMLAAASDIVETDELK
PKARKGLFDVVADFRRWQTLLETTPHTELAERILDESGYTAMWQADKSAEAPGRLENLKE
LIRSMEAFESMRGFLEHVALVMDAEQNENMDAVSIMTLHSAKGLEFDTVFLPGWEEGLFP
HQRALDEGGRAGLEEERRLAYVGITRAKRRCHIWFVSNRRIHGLWQSTLPSRFLDELPIA
HVEVAEQEVSYGGYGRGGYGQSRFDKADPFENNYQTPGWKRAQQHRSEATRDNWGTRSGH
AIERIGYGESGPRTRTIEGELVAKSTSAEPSRFNVGDRVFHIKFGNGNIAAIEGNKLTID
FDRAGQKRVLDGFVERV
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgaccaaaggttttgacgatattccctttttcgacgaggagcccgcgccgcggaaaccc
gcggccgccgacggcggcatcgccgcgcgcgccatggccgcccgcgacaaggcccagcga
ccggactatgtctccgggctcaatccggagcaacgggaggcagtcgaggcgctggaaggt
ccggtactcgtgctcgccggcgccggcaccggcaagacgcgcgttctgacgacgcggatc
gcccatatcctttcgaccggccgcgcctatccctcgcagatcctcgccgtcaccttcacc
aacaaggcggcgcgggaaatgaaggagcgcatcggcgtgctcgtcggccacgccgtcgaa
ggcatgccctggctcggcaccttccactcgatcggggtcaagctcctccgccgccatgcc
gagctggtgggcctgcggtccgacttcaccatcctcgacaccgacgacgtcgttcgcctc
atcaagcagctcatccaggcggagggtctcgacgacaagcgctggccggccaagcagttc
gccggcatgatcgacacctggaagaacaagggcctggacccgtcgcaaatcccggaaggc
gatgcccgcgcttttgccaacggcaagggccgcgagctctatgccgcctaccagaaccgg
ctgctgaccctgaatgcctgcgatttcggcgacctgctgctgcatccgatccgcatgttc
cgcgccaatccggacgtgctgaaggagtatcacgccaagttccgttacatcctcgtcgac
gagtaccaggacaccaacacggcgcaatatatgtggctgaggctgctggcccagcagacg
caagcgtcgcgaaatcgcccctcatccggcctgccggccaccttctccccgtccgacggg
gagaagggacaagcggcgcgttcgcaatcccccctctccccgtcagaacggggagagggc
cggggtgaggggcaacccaccgtcaacatctgctgcgtcggcgacgacgaccagtcgatc
tacggctggcgcggcgccgaggtggacaacattctccgcttcgagaaggatttccccggc
gccaaggtcatcaagctggagcgcaactaccgctcgaccgagcatatcctcggcgcggcg
gcgcatctgattgcccataacgagggccggctcggcaagacgctctttaccgagcgcacg
aatcccgacgacgagaaggtgcatgttcatgccgcctgggactccgaggaggaggctcgc
gcgatcggcgaagagatcgagcagctccagcgcaagaagcacaatctgaacgacatatcg
atcctcgtgcgcgcctctttccagatgcgcgaattcgaagaccgcttcgtcacgctcggc
ctcaactatcgcgtcatcggcggccctcgcttctatgagcggctcgaaatccgcgatgcc
atggcctatttccgcctcgtctgccagcccgccgacgacctcgccttcgagcggatcgtc
aacacgccgaagcgcggcctcggcgagacgaccgtccgcaccctgcacgactatgcccgg
gcccgcgacatcccgatgctggccgcggcaagcgacatcgtcgagacggacgaattgaag
ccgaaggctcgcaagggcctcttcgacgtcgtcgccgatttccgccgctggcagacattg
ctcgaaacgacgccgcacaccgaacttgcagagcggatcctcgacgagagcggctatacc
gccatgtggcaggccgacaaatcggcggaagcgcccgggcgcctcgaaaacctgaaggag
ctcattcgttcgatggaagccttcgagtccatgcgcggctttctcgagcacgtcgcgctg
gtgatggacgccgagcagaacgagaatatggatgccgtctccatcatgacgctgcattcg
gccaaggggctggaattcgacaccgtcttcctgccggggtgggaggaagggctcttcccg
catcagcgcgccctggatgaaggcggccgcgcaggtctggaggaggagcgccgcctcgcc
tatgtcggcatcacccgtgccaagcgccgctgtcatatctggttcgtttcgaaccgccgc
atccacggcctctggcaatcgacgcttccctcgcgcttcctcgacgagttgccgatcgct
catgtggaagtggccgaacaggaggtctcctatggcggttacggtcgcggcggttacggc
cagtcgcgcttcgacaaggccgatcccttcgagaacaattaccagacgcccggctggaaa
cgcgcccagcagcaccggtcggaggccacccgagacaactggggcacccgctccggccac
gccatcgaacgcatcggttacggcgaatcgggcccccgcacccgcaccatcgaaggcgag
ctcgtcgccaagtcgacgagcgccgagccctcccgcttcaatgtcggcgaccgggtcttc
cacatcaagttcggcaacggcaacatcgcggcgatcgagggcaacaagctgacgatcgat
ttcgaccgcgccgggcagaagcgcgtgctggatgggttcgtagaacgggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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