KEGG   Spiroplasma mirum ATCC 29335: SMM_1190
Entry
SMM_1190          CDS       T03003                                 
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
smir  Spiroplasma mirum ATCC 29335
Brite
KEGG Orthology (KO) [BR:smir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smir03016]
    SMM_1190 (trmE)
Transfer RNA biogenesis [BR:smir03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    SMM_1190 (trmE)
 Prokaryotic type
   Methyltransferases
    SMM_1190 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N GTP_EFTU Ras Roc RsgA_GTPase AIG1 Arf ABC_tran AAA_16 NOG1 AAA_24 GCV_T DMTF1_N
Other DBs
NCBI-ProteinID: AHF61557
UniProt: W0GN01
Position
complement(1119448..1120794)
AA seq 448 aa
MINDTIVAPATSMMNQAISIIRLSGPDAFPIINKIFSKVVKPHKNEIHYGFIKDGEETLD
QVLLMCFETPNSFTGEDVIEINCHGGVYITNKILKLLLKNGARLANRGEFSQRAFLNGKI
NLIQAEAINDLVHATNDQSAKIAISNLQNKNISVINNFRNDLLDIIANIEVNIDYPEYDG
VGDLTVGELHEKLKVLSNKVAEIIALSKIGKVVNDGVNLVILGQPNVGKSSLLNALLNED
KAIVSDTPGTTRDIVEGRVNIGNLTLNLTDTAGIRTTDNEIEQIGINKAKKQITLADLVL
LVFDSTRSLSLEEQELLELTKNKKRIIIINKIDLNPHHQYHFPADHQIEIAAIRRDIKPL
INKINELFSTDQLFKDDTIILSNIKQISILENVEKSLKNAYNNSTVGFPVDIVNVDLYES
WNLLGELLGESYDDNLLDTMFSKYCLGK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgattaatgacacaattgttgcaccagcaacaagtatgatgaaccaagcaatttcaata
attcgtctttcgggaccagacgcttttcctattattaataagattttttcgaaagtagtt
aaaccccataaaaatgaaattcattatggttttattaaagatggtgaagaaacattagat
caagttttattaatgtgttttgaaactcctaattcttttacgggagaagatgtaattgaa
ataaactgccacgggggagtctatattactaataaaattttaaagttattgttaaaaaat
ggtgctcgtttagctaaccggggggaattttcccaacgagcttttttaaatggcaaaatt
aacttaattcaagccgaagccattaatgatcttgtccatgccacaaatgaccagagtgct
aaaattgcgattagtaatttacaaaataagaatattagtgttattaataattttcggaat
gatttgctagatattatcgctaatattgaggtaaatattgattatcctgaatatgatggg
gtcggtgacttaactgttggtgaactccatgaaaagttgaaggttttatctaataaagtt
gcggaaattatcgctttaagtaaaattggtaaagtagtaaatgatggggttaatttagta
atcttaggacaacctaatgttggtaagtcatcgcttttaaacgcattactaaacgaagat
aaagcaattgtttctgatacccctggaacaacccgagacattgttgaaggacgggttaat
attggaaacttaactttaaatcttactgatacagctggaattcgcacaaccgataatgaa
attgaacaaattggaattaataaagcgaaaaaacaaattaccttagctgatttagtatta
ctagtatttgatagtacgcgttctttatcactagaagaacaagaattattagagttaaca
aaaaataaaaaacgaattattattattaataaaattgatttaaatcctcatcaccaatat
cacttcccagcggatcaccaaattgaaattgcggcaattagacgcgatattaaaccctta
attaataagattaatgaattgtttagtactgatcagttatttaaggatgacacaattatt
ttaagcaatataaaacaaatttctatccttgagaatgtagaaaaatctttgaaaaatgca
tataataatagtacagttggatttcctgttgatattgttaatgttgatttatatgaatca
tgaaatctactgggagaattgttaggagaaagttacgatgataatttgctagacacaatg
tttagtaaatattgtcttggaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

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