KEGG   Spongiibacter sp. IMCC21906: IMCC21906_00657
Entry
IMCC21906_00657   CDS       T03945                                 
Name
(GenBank) replication restart DNA helicase PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
spoi  Spongiibacter sp. IMCC21906
Pathway
spoi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IMCC21906_00657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spoi03400]
    IMCC21906_00657
Enzymes [BR:spoi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IMCC21906_00657
DNA repair and recombination proteins [BR:spoi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     IMCC21906_00657
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR zinc-ribbons_6 AAA_30 PriA-like_WH TrwB_AAD_bind DAP3
Other DBs
NCBI-ProteinID: AKH68350
UniProt: A0A0F7LYH3
Position
complement(704696..706963)
AA seq 755 aa
MPSRFIKPSDVATLFLYTAGFNFTLNFIATGMNTLVSIAIPSPLRRHFDYLWPAELTAPR
PGERVLVPFGNRRLVATVLDSLASSDVPTKQLKSVLERLDQGEPAISKDLLALARWAASY
YHHPIGECLQQILPVALRKATPPKIATTAWQAHGNTDELAPLPKQAHQQRALLKAIQQNG
QLSRRQIKDMGFSNSVLNALIKGHYLSPCAETTPAPPAPQPPLTPNPEQAAAVNTLTAAL
GRFERFLLEGVTGSGKTEVYLQAIHSVLQRGQQALVLVPEIGLTPQTLARFEQRYPGQVV
ALHSGLNDNERYRNWQAIKHGKAAIVLGTRSAVLCDFAELGLIIVDEEHDASYKQQDGWH
YSARDIAVKRAADWSCPVLLASATPSLDSLYNVKQGRYQQLVLQQRAGDAKPPSQRLIDI
RQQPLDEGLSPLLFKQIEDTLNAGNQALVFLNRRGFAPLVQCHSCGWMAECESCDARMTV
HFNRRELRCHHCDARGALPSHCPQCQNSSLTFQGPGTERLEMALKRRFADTPVIRIDRDT
TSNKGSMQTLVDRIHNGDPAVLVGTQMLAKGHHFPDVTLVAVVDIDGGLFSPDFRAGERT
GQLLLQVAGRAGRGDKPGTVLIQTHCPDHPVLQQLVHSGYAGFANTLMAERELMGLPPCS
FMAVMRCDAKQLSSAEQFLTTVSQGLQNHKQCDIIGPLPAPMARRAGRFRCSLLFQAAKR
SQLHTALNQACHVAEQQRRLGDLRWSIDVDPIEMF
NT seq 2268 nt   +upstreamnt  +downstreamnt
ttgccgtctcggtttatcaagccatcagacgtcgccacacttttcttatacactgctggc
tttaattttaccctgaattttatcgccaccggcatgaatacactggtttccattgccatt
cccagccctctgcgccgccactttgactacctgtggccagcggaactgactgcgcccaga
cccggcgaacgggtactcgtgccctttggcaaccgccgccttgttgccaccgtactcgat
tcactggccagcagcgatgttccgaccaagcaactcaaaagcgtattagagcgactggat
caaggcgaacccgccatcagcaaggatctgctcgcactggcgcgctgggcagcgagctac
tatcaccaccccataggtgagtgcctgcaacagatactgccagtcgccctgcgcaaagcc
acaccacccaaaatcgccaccaccgcctggcaggcacatggcaatacagacgaactggct
ccgttacccaagcaggctcaccagcaacgtgcgctactcaaggccattcagcaaaacggt
cagctcagtcggcgccaaattaaagacatgggttttagcaacagcgtcctcaacgcccta
atcaaaggacattatttaagcccctgtgcagaaactactccagcgccgccagcgcctcaa
ccaccactcacccccaacccagagcaagcggccgccgtaaatacacttacggcagcactg
ggccgatttgagcgtttccttttagaaggtgtaacaggcagcggcaagaccgaggtctac
ctgcaagcaattcacagcgtattgcaacgcggccaacaggcgctggtgctggtccccgaa
atcggcctgacgccccaaaccctggcccgctttgaacaacgctaccccggccaggtagtc
gcgctgcattccggcctcaatgacaacgagcgctaccgcaattggcaggcaatcaaacac
ggaaaagccgctatcgttctcggcacccgctccgcggtgctttgcgactttgccgaactc
ggattgatcattgtcgacgaagagcacgatgcctcttacaaacaacaagacggctggcat
tattcggccagagacatcgccgttaaacgcgccgcggactggtcttgcccggtgctgctg
gcgagcgccacaccaagtttggacagcctctataacgtcaagcagggccgctatcaacaa
ttggtactgcagcaacgggccggggacgccaagccgcccagccaacggctcatcgatatt
cgccaacaacccttagacgaaggcttaagtccgctgctgttcaagcaaatagaggacacc
ctcaacgccggcaatcaagcgctggtatttctcaaccgccgggggtttgcgccgctggtg
cagtgccacagttgcggctggatggccgaatgtgaatcctgcgatgcccgcatgactgtg
cattttaatcggcgggaactgcgctgccaccactgcgacgcccgaggggcactgcccagc
cactgtccccaatgccagaacagcagcctgacgtttcagggccccggcaccgagcgttta
gaaatggcgttaaaaaggcgctttgccgacacgcctgttattcgcattgaccgggacacc
acctccaacaaaggcagcatgcaaaccttggtggaccgtattcacaatggcgatcctgcg
gtattggtaggcacccaaatgctggccaaaggtcatcactttcccgatgttaccctcgtc
gccgttgtcgatatcgatggcggtctgttcagcccggactttcgggcgggagaacgcacc
gggcaattactgttacaagtcgctggccgggccgggcgaggtgacaaacctggcacggtg
ctgattcaaacccactgccccgaccatcccgtattgcaacaactggtacacagcggatat
gccggttttgccaacactttaatggccgagagggaattgatgggcttgccgccctgtagt
tttatggcggtgatgcgttgcgacgccaagcaactcagcagtgccgagcaatttctcacc
accgtgagtcaaggtcttcaaaatcacaagcaatgcgatattatcggccctctgcccgcg
ccaatggcccggcgggcggggcgctttcgttgcagcctgctctttcaggccgcaaaacgc
agtcaacttcacacggccttaaaccaagcctgccacgtcgcggaacaacagcggcgcctt
ggcgacctgcgctggtctatcgatgtcgatcccattgagatgttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (53)   

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