KEGG   Strongylocentrotus purpuratus (purple sea urchin): 373417
Entry
373417            CDS       T01019                                 
Symbol
PRP1
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    373417 (PRP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spu03041]
    373417 (PRP1)
   03009 Ribosome biogenesis [BR:spu03009]
    373417 (PRP1)
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     373417 (PRP1)
Spliceosome [BR:spu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    373417 (PRP1)
 Complex B
    373417 (PRP1)
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    373417 (PRP1)
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  90S particles
   Helicases
    373417 (PRP1)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N Helicase_C DEAD AAA_22 nSTAND3 AAA_19 AAA_7 SRP54 ResIII Flavi_DEAD TsaE AAA ABC_tran NB-ARC AAA_25 T2SSE PhoH AAA_29
Other DBs
NCBI-GeneID: 373417
NCBI-ProteinID: NP_001116971
UniProt: A0A7M7NTI3
AA seq 750 aa
MSKRRLDIDDSYSKRKGESDYRDRDRDREKRDRDDDRGDRDRDRRDRDRDKTRWESAGVT
SAPMSIPTSTVAINPLSLTPYSQRYFTILAKRKTLPVWEYKDKFMQMLEEQKIIVLVGET
GSGKTTQIPQWCMEYVRKKFPVNSMKIVACTQPRRVAAMSVAQRVADEVDVVLGQEVGYS
IRFEDCTSNKTLVKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVE
KQRSDLKLVVMSATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVV
QIHMCEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRI
FEHAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP
ISKASAQQRAGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGID
DLVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTD
YSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNED
PQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYLNIRKALVNGFFMQ
VAHLERTGHYLTVKDNQVVQLHPSTCLDHKPEWVLYNEFVLTTKNYVRTVTDIKADWLMR
LAPQYYDMPNFPQCEAKRILEKIAMKIQGC
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgtcaaaaagacgtttagatattgatgattcatacagtaaaaggaagggagagtcagac
tatagagacagggatcgagacagggaaaagagggacagagatgacgatagaggggaccgg
gatcgtgacagaagagatcgtgacagagataaaacgcgatgggagtctgcgggggtcacg
agtgcccccatgtccatcccaacgtctaccgtggccatcaatcccttgagcctcacacct
tactcacaaagatacttcaccattctagccaagaggaaaacactgccagtatgggagtac
aaagacaagtttatgcaaatgctggaagaacagaagattattgtgcttgtaggagagact
gggtctggtaaaacaacacaaatccctcaatggtgcatggagtatgtgaggaagaagttc
cctgtgaattctatgaagattgttgcttgcacccaaccgaggagagtggctgctatgagt
gtagcccagcgtgtagccgatgaggtcgatgtcgtcctgggtcaagaggtcggatacagc
atcaggtttgaagactgcacatcgaacaagacgctggtcaaatacatgactgacggtatg
ttgctgagggaaggtatgactgatcccttgttggagaggtatggggtgatcctgctcgat
gaggcccatgaacgtaccgtagctacagacatcctgatgggtctgcttaaagaggtggag
aaacagagatcagatctcaaactcgttgtcatgagtgctacccttgatgccggaaaattc
cagcattattttgacaatgcccctctgatgaccgtccctggacgtacccatcctgtagag
atcttctacaccccagagcccgagagagactacctggaggcggctatacgtaccgtcgtt
cagattcacatgtgtgaggaggtggagggagatgtccttctcttcttgactggccaggag
gaaatagaagaggcgtgtaaacgtatcaaacgagaggtagacaacctgggtcctgaggta
ggggacctgaaaaccatccctctctactccaccctcccccctgccatgcagcagaggatc
tttgagcatgccccgcccaataaggccaacggagccatcggtcgcaaggtggtggtctcc
accaacattgctgagacatcactgaccatcgatggcgttgtgtttgtgattgatcctgga
tttgcaaagcaaaaggtgtacaaccctcgtatcagggtggagtctctgctggtgtcgccc
atcagtaaagccagcgcccagcagagggctggacgtgctggccgtacgcgtccaggcaag
tgtttccgcctctacactgagaaggcctatgatagcgagatgcaggacaacacatatcca
gagatcctgagatccaatctgggtaccgtggtgctgcagctcaagaagctgggtatcgat
gatctggttcattttgactttatggaccctccagcccctgagactttgatgagagcccta
gaactgctcaactacctgggtgccctggatgacagtggtgaccttacccgcctggggtca
atgatggccgagttccctctcgatcctcagctggccaagatggtcatcgccagcactgac
tacagctgctccaatgagatcctctctgtcacagctatgttatcagtcccacagtgcttc
ctgcgaccgaacgaggccaagaagctcgctgacgaggctaagatgaggttcgctcatatt
gacggcgatcacctgacgctactcaacgtctaccatgccttcaagcagaacaatgaggac
cctcagtggtgctacgataacttcatccagtaccgatccctgaagtcagcggacagtgta
cggcagcagctggctaggatcatggaccgcttcgctctacaaaggaccagcacaaacttc
aacagcaaggactactacctgaacatccgcaaggctctagtcaatggattcttcatgcag
gttgctcacttggaaaggactggtcactatctgacggtcaaggataaccaggttgtccag
cttcatccatccacctgtcttgaccataagcctgaatgggttctctacaatgagtttgta
ctgaccactaagaactacgtccgaacagtcacagatatcaaggcagactggttgatgcgt
ctcgctccccaatactatgacatgcccaacttcccccagtgcgaagccaagaggatattg
gagaaaatcgccatgaagatacaaggatgctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (20)   
   Pfam (20)   
All databases (78)   

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