KEGG   Serratia sp. AS12: SerAS12_3871
Entry
SerAS12_3871      CDS       T01502                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
srs  Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:srs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srs03009]
    SerAS12_3871
Enzymes [BR:srs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SerAS12_3871
Ribosome biogenesis [BR:srs03009]
 Prokaryotic type
  rRNA helicases
   SerAS12_3871
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 AAA_22 CMS1
Other DBs
NCBI-ProteinID: AEF51923
Position
4143648..4144973
AA seq 441 aa
MTATNFSELDLDERLIKALSDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGDAIREFAERILKEPVEIEADPSRRERKKILQWYYRADDVQHKTAILV
HLLQQPDVLKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPSTKVPSEKSNGKPSKKVLAKRAEDKEKNKEKAKVKVRHR
DAKNVGKRRQPKAKPESNGAK
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgacagcaaccaatttttccgaactcgatctcgatgaacgcctgataaaagccctgagc
gataaaggctacgaacgcccgaccgccattcaagccgaggctatcccacctgcgatggat
gggcgcgacgtattgggttcggcgccaaccggcaccggcaagaccgccgcatttttgctg
ccggtattgcagcatctgctggactttccacgcaagaagtccggcccaccgcgcgtactg
atcctcaccccgacgcgcgaactggcgatgcaggtagccgaccaggcacgtgagctggct
gcccatacttcgctggatatcgccaccattaccggcggcgtcgcctatatgaaccacgcg
gaagtcttcagcgaaaaccaggatgtggtggtcgccaccaccggtcgcctgctgcaatac
atcaaagaagaaaacttcgactgtcgcgcggtagaaacgctgatcctcgatgaagccgac
cgcatgctggacatgggcttcgcgcaggatatcgaaaccatttccgccgaaacccgctgg
cgcaaccagaccctgctgttctccgcaacgctggaaggcgatgccatccgcgaattcgcc
gagcgtattctgaaggagccagtggaaattgaagccgacccttcacgccgcgaacgcaaa
aagatcctgcagtggtactaccgtgccgacgacgtgcagcataaaaccgccattctggtg
catttgctgcaacagccggacgtgctgaaatccgtgatcttcgtccgcaaacgcgagcgc
gtgcacgagctggcggcctggctgcgcgaggcaggcatcaacacctgctatctcgaaggc
gaaatggtgcaggccaagcgcaacgaagcggtaaaacgcatgatggacggccgcgtcaac
gtgctggtcgccaccgacgttgccgcccgtggtctggatatcctggatatcacccacgtg
ttcaacttcgacatgccgcgtactgcggacacctatctgcaccgcattggccgcaccggc
cgcgctgggcgcaaaggtaccgcgatttcgctggttgaagcgcacgatcacctgctgttg
ggcaaagtgggccgttacctgaacgaaccgctgaaagcgcgtgtgatcgatgaactgcgt
ccgtcaaccaaagtgccgagcgaaaagagcaacggcaaaccttcgaagaaggtgctggcc
aagcgtgcggaagacaaagaaaagaacaaagaaaaagccaaggtgaaagtacgtcatcgc
gatgcgaaaaacgtgggcaaacgtcgccagccaaaggccaagcctgagagcaacggcgcg
aagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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