KEGG   Streptococcus suis D9 (serotype 7): SSUD9_1566
Entry
SSUD9_1566        CDS       T02022                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
ssq  Streptococcus suis D9 (serotype 7)
Pathway
ssq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SSUD9_1566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssq03019]
    SSUD9_1566
   03009 Ribosome biogenesis [BR:ssq03009]
    SSUD9_1566
Enzymes [BR:ssq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SSUD9_1566
Messenger RNA biogenesis [BR:ssq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SSUD9_1566
Ribosome biogenesis [BR:ssq03009]
 Prokaryotic type
  rRNA helicases
   SSUD9_1566
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: AER17750
Position
complement(1553549..1555129)
AA seq 526 aa
MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDTNNQAIQALIIAPTRELAVQSQEELFKFGREKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGFLDDIEAIIERVPESRQTLLF
SATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYYLRVKEHEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLAIIEDLTKK
RMKGLKPATAQEAFEAKKKVALKKIEREMADETIRSNFDKFKKDAIQLAAEFTPEELALY
VLTLTVQDPESLPEVEIAREKPLPFKFAPGQAKGKGGRGGRDRDRGGRRDGDRNRDRGGR
RGDRNDRNRRDDKFKRDNRRQDNKKPHQRTSSEKKTGFVIRNKGER
NT seq 1581 nt   +upstreamnt  +downstreamnt
ttgaaatttacagatttacaattatcagaagatattttgcttgccgttgagaaggctggt
tttgaaacgccgtcaccaatccaggagcagaccattccgcttgctcttgaaggtaaagat
gtgattggtcaagcccagacggggacagggaaaactgcagcctttggtttgccaaccctc
aacaaaattgacacaaacaatcaagcaattcaggccttgattatcgccccaacacgtgag
ttggcggtgcagagtcaagaagaacttttcaaatttggtcgtgaaaagggtgtgaaagtc
cgctctgtttacggtggctcaagcattgaaaagcaaatcaaggcccttcgttcaggtgct
cacatcgttgttggtacaccaggtcgcctcttggacttgatcaaacgcaaggccctcaaa
cttgacggtgttgaaactctcattcttgacgaggcagatgaaatgctcaacatgggcttc
ttggatgatattgaagcgatcatcgaacgtgtaccagagagccgtcaaacccttctgttt
tctgcaaccatgccagagccaatcaagcgtattggtgtcaagttcatgaaagaacctgag
cacgttaagattgcagcaaaggaattgactaatgtcaatgttgaccaatattatcttcgt
gtcaaagaacatgaaaaattcgacaccatgactcgtcttatggatgttgaccagccagaa
ttgtctattgtctttggtcgtaccaaacgccgtgtcgatgaattgactcgtggtttgaaa
ttgcgtggtttccgtgcagaaggtattcacggagatttggaccagaacaagcgtcttcgt
gtcattcgtgattttaaaaatgatcaaattgatgtcttagttgcgacagacgttgcggcc
cgtggtttggacatctcaggtgtaacgcatgtctataactacgatattccacaggaccct
gaaagctatgtgcaccgtatcggtcgtacaggtcgtgcgggtcaatcaggtcagtctatt
acctttgtttcgccaaacgagatgggctacttggccatcatcgaagatttgaccaagaaa
cgcatgaaaggtctcaagccagcaactgctcaggaagcatttgaagccaagaagaaagtt
gctttgaagaagattgagcgtgaaatggcggatgaaaccatccgtagcaattttgataag
ttcaagaaagatgctattcagttagcggctgaatttacccctgaagagttagcgctttat
gtattgaccttgactgttcaggatccagaaagtctgccagaggtagaaattgcgcgagaa
aaaccactgccattcaagtttgcacctggtcaagccaagggcaagggtggacgtggtggt
cgcgaccgtgatcgcggtggtcgtcgtgatggagaccgcaaccgagaccgcggaggacgc
cgtggtgatcgtaatgaccgcaaccgtcgcgatgacaagtttaaacgcgacaaccgccgt
caggacaacaaaaaaccacaccaacgcacatcaagtgaaaagaaaacaggctttgttatc
cgcaataaaggggagagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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