KEGG   Sediminicola sp. YIK13: SB49_14280
Entry
SB49_14280        CDS       T04145                                 
Name
(GenBank) type I restriction endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
syi  Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:syi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:syi02048]
    SB49_14280
Enzymes [BR:syi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SB49_14280
Prokaryotic defense system [BR:syi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SB49_14280
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD DUF6036 SNF2-rel_dom DUF87
Other DBs
NCBI-ProteinID: ALM08833
UniProt: A0A0S1SE17
Position
3204105..3207323
AA seq 1072 aa
MKFTEAKLEQAFIELLGNEGYPHFVGSSLVRSSEDEVLIEEDLKTYLLTRYENANLTETE
AQSIILQLKTLSSADLYESNKKIMQWLADGFILKREDRTQKDIHISLIDYAGLDRQRQSE
NLDIIAAEPEEQYPPDTNIYKFVNQLEIVGTERRIPDGILYINGLPVVVFEFKTAIQENT
TIHKAFVQLTTRYKRDIPELFKYNAFCIISDGVNNKAGSFFAPYEFYYAWRRIAGLAKDV
DGINSMFTLVQGMLHKNRLRDIIQNFIYIPDSSKKDEKIVCRYPQYYAARSLYENIKKAE
KPQGDGKGGTYFGATGSGKSFAMLYLTRLLMKSKHFESPTIVLITDRTDLDDQLSGQFTN
AKQFIGDNAVESVESRADLRTKMQGRNSGGVFLTTIHKFTEDTELLTERTNVICISDEAH
RSQTNLDQKVKVTKDGVKKTYGFAKYLHDSLPNATFVGFTGTPIDATLDVFGKVVDAYTM
TESVRDEITVRIVYEGRAAKVALHNSELEKIEKYYEEAAEAGANEYQIEESKKATATMNA
ILGDPDRLLKLAQDFVQHYENRVNEGATVKGKAMFVCSSREIGYEFYKNVIALRPEWAEI
RIAEEVAVLTDKDKREIKPMERIKMIMTRGKDDPKEMYDLLGTKEYRKELDRQFKNEKSN
FKIAIVVDMWLTGFDVPFLDSIYIDKPIQQHNLIQTISRVNRNFEGKNKGLVIDYIGIKK
AMNMALAKYNKGERENFEDIQESLIIVRNHLDLLAKVFHKFDSSKYFGGATLEQLNTLNM
AAEYVQLTKDLETRFMGLVKRLKAAYDICAGSEHLTQKERDNTHFYLAVRSIVFKLTKGS
APDTARMNARVREMIKDALESDGVQEIFKLGDETQSEQDLFSEDYLAKIDKIKLPHTKIK
LLQQLLAKAIGEIKKVNKVKGIDFSKKMQTLVERYNERKEDDVLRSEVFEEMAEHLTNLI
WEVQKEFSAGDELGIDFEEKAFYDILKDLCIKYDFKYPEDKLIVLSQAVKDLVDSQAKYP
DWSKREDIKSALKVGLIILLDEHGYPPVERDEVYKDIFEQAENFKKNRVITK
NT seq 3219 nt   +upstreamnt  +downstreamnt
atgaaattcacagaagccaaattagagcaagcatttatagagcttttaggaaatgaaggc
tatccacattttgtgggcagtagtttggtacgttcaagcgaagatgaagtactcattgag
gaagacctaaaaacctacttgctcactcgctatgagaatgctaacctaaccgaaacagaa
gctcaatccattattctgcaactcaaaaccctttcttcggcagacctttacgaaagcaac
aaaaaaataatgcagtggttggcagacggttttattctgaaacgagaagaccgcacccaa
aaagacattcatatttcgcttattgattatgcaggtttagaccgtcaacggcaaagtgaa
aatttagacattattgccgctgaacccgaagaacaatatccacctgataccaatatttac
aagtttgtcaaccaattggaaattgttggcacagaaagacgtattccagacggcatttta
tacatcaatggtttgcctgtggtggtttttgagtttaaaacagccattcaagaaaacacc
accattcacaaagcttttgttcaattaacaactcgttacaaaagagacattcccgagctt
tttaaatacaatgccttttgcatcatcagtgatggtgtaaacaacaaagcaggctcgttc
tttgccccttatgaattttactatgcttggcgtagaattgcgggtttggccaaagatgtg
gacggcataaacagtatgttcactttggttcaaggaatgctgcataaaaaccgcttgcga
gacattattcagaacttcatctacattccagattcatccaaaaaagacgaaaaaatcgtt
tgtcgctatccgcagtattacgcagctcgcagtttatacgaaaacatcaaaaaagctgaa
aaaccacaaggagacggaaaaggcggaacttactttggagctacaggaagcggaaagagt
tttgcaatgctttatctcactcgtttgttgatgaaaagcaagcattttgaaagtccaacc
attgttctcattaccgacagaaccgatttagacgaccaactttcagggcaatttaccaat
gccaagcaattcattggagataatgcggtagaaagtgttgaaagcagagccgatttgaga
accaaaatgcaaggcagaaatagcggtggcgtgttcttgaccactattcataagtttaca
gaagacaccgaactgcttaccgaaagaaccaatgtgatttgtatttcagatgaagcccac
agaagccaaaccaatctcgaccagaaagtaaaagtcaccaaagatggagttaagaaaacc
tacggttttgctaaatatttacacgattcattgcccaatgccacctttgtaggattcaca
ggtacgccaatagatgccactttggacgtgttcggaaaagtagtagatgcttacacaatg
acggaatctgttagagatgaaattacggttcgcatagtctatgaaggaagagcagctaag
gtagccttgcacaatagcgaattagagaaaattgaaaaatattacgaagaagcagccgaa
gcaggagccaatgaataccaaatagaagaaagcaaaaaggcaacggctacaatgaacgcc
attttaggcgacccagaccgcttgcttaaattggcgcaagactttgttcagcactatgaa
aacagagtaaacgaaggagctactgttaaagggaaagcaatgtttgtttgcagtagccgt
gaaattggctacgagttttacaaaaatgtaatcgctttaagacctgaatgggcggaaata
agaattgctgaagaagtagctgttttaacagacaaggacaaaagggaaatcaaaccaatg
gagcgaatcaaaatgataatgaccagaggaaaagacgacccaaaagaaatgtacgatttg
ctcggcacaaaagaataccgcaaggaattggacagacagtttaaaaatgaaaaatctaat
ttcaagattgccattgtggtagatatgtggcttacaggttttgatgtgccgtttttggat
tccatttacattgacaagcctattcagcaacacaatttgattcagaccatttcaagagtt
aaccgaaattttgaaggcaaaaacaaaggtttggttatagattacattggcatcaaaaag
gctatgaatatggctcttgccaaatacaacaaaggcgaaagagaaaactttgaagacatc
caagaatcgctcataattgtaagaaatcatttagaccttttagccaaagtcttccataag
tttgacagttcaaaatatttcggtggcgcaactttggagcagttaaacaccttgaatatg
gctgctgaatatgttcagttgaccaaagacttggaaacccgatttatgggcttggtaaaa
cgtctgaaagccgcttatgatatttgtgcaggaagtgaacatttaacacagaaagaaagg
gataacacgcatttctatttggctgtaaggtcaatcgttttcaaactgaccaaaggcagt
gcacccgatacggcacggatgaacgccagagttagggaaatgataaaagatgcattggaa
agtgatggagttcaggaaatcttcaaactcggtgatgaaacacaaagcgaacaggacctt
ttttcagaagactatttggcgaagattgacaaaatcaagttgccacacactaaaatcaaa
ttgcttcaacagcttttagccaaagccattggagagattaagaaagtcaataaggtaaaa
ggaattgacttctctaagaaaatgcaaaccttggtagaacgctacaacgagcgaaaagaa
gatgacgtgttgcgaagtgaagtgtttgaagaaatggcggagcatttaactaatttgatt
tgggaagttcaaaaggaattttccgcaggtgacgaattaggaattgattttgaagaaaaa
gcattttacgacatcctgaaagatttgtgtatcaagtatgacttcaaatatcccgaagac
aaattaattgttttatcccaagcagttaaagacttggtagactcacaagccaaatatcct
gattggagcaaacgagaagacataaaatccgctttgaaagtcggactaataatcctcttg
gacgaacacggttatccgccagtagaaagagacgaagtatataaagacatatttgaacaa
gcagagaattttaaaaaaaatagagtaataacgaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

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