KEGG   Synechocystis sp. PCC 6803: sll1143
Entry
sll1143           CDS       T00004                                 

Gene name
uvrD
Definition
(GenBank) DNA helicase II
  KO
K03657  DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03420  Nucleotide excision repair
syn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    sll1143 (uvrD)
   03430 Mismatch repair
    sll1143 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syn03400]
    sll1143 (uvrD)
Enzymes [BR:syn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     sll1143 (uvrD)
DNA repair and recombination proteins [BR:syn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     sll1143 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     sll1143 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 DEAD ResIII Helicase_RecD
Other DBs
NCBI-ProteinID: BAA17505
CyanoBase: sll1143
CYORF: sll1143
UniProt: P73465
Position
complement(1022278..1024659)
AA seq 793 aa
MPMTVVPDYLAHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIAHLIRQHRINPENI
LAVTFTNKAAKEMKERLEKIFAQAWAQQEFSQRWELLGKYEQKQLLSRVYKTVTKPLWIG
TFHSLCSRILRYDIDKYQDSSGRRWTKQFSIFDESDVQSLFKTIVTKDMDLDEKQFNPKS
IRYQVSNAKNLGQSPETYLRENPSYKGRVIAEVYQAYQNQLAANNALDFDDLILIPTRLF
QQNESVLGYWHRKFNHILVDEYQDTNRIQYDLIRLLSTNGEERQSEWDWRGRSTFVVGDA
DQSIYSFRMADFTILLNFQEDFGDRLLDGETTTMVKLEENYRSRENILQAANHLIEHNSQ
RIDKILKATRSGGDDIILYQADDERDESRFVINKILSLRKNNPELNFGDFAILYRTNAQS
RAFEEQLLNNNIRYNIVGGFRFYDRQEIKDAIAYLRVLVNPADTVSLLRIINTPRRGIGK
STIEGFVNASKELDIPLWEIITDETSVNTLAGRSGKKTLQFARMLQEIQSQIGELSASEA
LSLVLEKSNYVDDLKQKGTEEADNRLANLGELDNAVRQFEAESEDPSLVDFLASASLTSD
LDDLEESGDEVSLMTLHSAKGLEFPVVFLVGLEQGTCPHARSLNDPLDLEEERRLCYVGI
TRAQENLFLTHARMRYIWGSLETKIPSQFLQELPPDLLADGSTGRRTGRNAPAADPKGPS
IAQKQARKKTGSQSTQPAKDLIWNVGDRVMHNNFGEGTVTHILGKGHKANLAIKFPGIGV
KIIDPSFAPLRRL
NT seq 2382 nt   +upstreamnt  +downstreamnt
gtgcccatgactgttgtccccgactaccttgcccacctcaatccttcccaacggcgggcg
gtggagcatttttgtggccctcttttggtggtggccggggccggctcagggaaaactagg
gcactaacctaccgcattgcccatctaattcgtcagcatcgcatcaatccggaaaatatc
ctggcggtaacctttaccaataaagccgccaaggaaatgaaggaacgtttggaaaagatt
tttgcccaagcctgggcccaacaggaatttagccaacggtgggaattgttggggaaatat
gaacaaaaacagttgctttccagggtgtacaaaacagttacgaaacccctctggattggc
actttccacagtctatgttctcgtattctccgctacgacattgataaatatcaggacagc
agtggccgccgttggacaaaacagttttccatttttgatgaaagtgacgtgcaaagtttg
tttaagaccattgtcactaaggatatggatttggacgaaaaacagttcaatcctaagagt
attcgctaccaggtcagtaatgccaaaaacctcgggcaatcaccggagacctatctaagg
gaaaatcccagttataaaggtagggtcattgcggaagtttaccaagcttaccaaaatcaa
ttggccgctaataacgctctagattttgatgatttaattctcatccctacccgtttattt
caacaaaatgaatcagttttaggctactggcaccgaaaatttaaccatattttggtggat
gaataccaagacactaatcgcatccaatatgatttaattcgtctgctgagcaccaatggg
gaagaacggcagtcggagtgggattggcgggggcgttccacttttgtggtgggggatgca
gaccaatctatttacagtttccgcatggcagactttaccatcctgctcaatttccaagag
gattttggcgatcgcctgttggatggggaaacgaccaccatggtcaaactagaggaaaat
taccgttctcgggaaaatatcctccaagcggctaaccatttaattgaacataatagccaa
cggattgacaagatcctcaaggctacccggagtggcggagatgatattatcctttaccag
gcggatgatgaaagggatgagtcccgttttgtgattaataaaattctgagcttaaggaaa
aataacccagaattaaattttggtgattttgctattttatatcgcaccaatgcccaatcc
cgggcctttgaagaacagctattaaataataatattcgctacaatattgtcggtggtttt
cgcttctacgatcgccaggaaattaaagatgccattgcctatctccgggtgttagttaat
ccggcggatacggtcagcttgttgcgtatcatcaatactccccggcggggcatcggtaaa
tccaccattgaaggttttgttaatgcctctaaggaattggacattcccctgtgggaaatt
attaccgacgaaacttcggtgaatactctggccgggcgatcaggtaaaaaaaccctgcaa
tttgcccgcatgctccaggaaatccaaagccaaattggtgagctttctgcgtcggaagcc
ctcagcttagtgttggaaaaatccaattatgtggacgacttaaagcaaaaaggcaccgaa
gaagcggataatcgcctggccaacctgggggaattggacaatgcagtgcgacagtttgaa
gcagaaagtgaagaccctagcctagtggattttttggcttcagcatccctcacttccgac
cttgatgacctggaggaatccggagacgaagtgtccctcatgactctccactctgctaag
ggcctggaatttccagtggtcttcttagtggggttggagcagggcacttgcccccacgcc
cgcagtttaaatgatcctttggatctagaagaggaacgccgtttatgttacgtgggcatt
accagagcccaggaaaatctctttttgacccatgctcgcatgcgttacatctggggttct
ttagaaaccaaaataccgtcccaatttctccaggaattaccaccggatttattggccgat
ggctcaactggtcgtagaactggtcgcaatgctcctgccgccgatcccaagggaccttcc
attgcccaaaaacaagcccgaaaaaaaactggttcccagtccactcaaccggctaaagac
ctaatctggaatgttggcgatcgggtaatgcacaacaattttggagaaggcactgtgacc
cacattttaggcaaaggccataaagctaatttggccatcaaatttcccggcattggtgtg
aaaattattgaccccagtttcgcccctctacgccgcctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   CYORF (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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