KEGG   Synechocystis sp. PCC 6803: sll1143
Entry
sll1143           CDS       T00004                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03420  Nucleotide excision repair
syn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    sll1143 (uvrD)
   03430 Mismatch repair
    sll1143 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syn03400]
    sll1143 (uvrD)
Enzymes [BR:syn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     sll1143 (uvrD)
DNA repair and recombination proteins [BR:syn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     sll1143 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     sll1143 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 DEAD Viral_helicase1 ResIII AAA_11 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: BAA17505
UniProt: P73465
Position
complement(1022278..1024659)
AA seq 793 aa
MPMTVVPDYLAHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIAHLIRQHRINPENI
LAVTFTNKAAKEMKERLEKIFAQAWAQQEFSQRWELLGKYEQKQLLSRVYKTVTKPLWIG
TFHSLCSRILRYDIDKYQDSSGRRWTKQFSIFDESDVQSLFKTIVTKDMDLDEKQFNPKS
IRYQVSNAKNLGQSPETYLRENPSYKGRVIAEVYQAYQNQLAANNALDFDDLILIPTRLF
QQNESVLGYWHRKFNHILVDEYQDTNRIQYDLIRLLSTNGEERQSEWDWRGRSTFVVGDA
DQSIYSFRMADFTILLNFQEDFGDRLLDGETTTMVKLEENYRSRENILQAANHLIEHNSQ
RIDKILKATRSGGDDIILYQADDERDESRFVINKILSLRKNNPELNFGDFAILYRTNAQS
RAFEEQLLNNNIRYNIVGGFRFYDRQEIKDAIAYLRVLVNPADTVSLLRIINTPRRGIGK
STIEGFVNASKELDIPLWEIITDETSVNTLAGRSGKKTLQFARMLQEIQSQIGELSASEA
LSLVLEKSNYVDDLKQKGTEEADNRLANLGELDNAVRQFEAESEDPSLVDFLASASLTSD
LDDLEESGDEVSLMTLHSAKGLEFPVVFLVGLEQGTCPHARSLNDPLDLEEERRLCYVGI
TRAQENLFLTHARMRYIWGSLETKIPSQFLQELPPDLLADGSTGRRTGRNAPAADPKGPS
IAQKQARKKTGSQSTQPAKDLIWNVGDRVMHNNFGEGTVTHILGKGHKANLAIKFPGIGV
KIIDPSFAPLRRL
NT seq 2382 nt   +upstreamnt  +downstreamnt
gtgcccatgactgttgtccccgactaccttgcccacctcaatccttcccaacggcgggcg
gtggagcatttttgtggccctcttttggtggtggccggggccggctcagggaaaactagg
gcactaacctaccgcattgcccatctaattcgtcagcatcgcatcaatccggaaaatatc
ctggcggtaacctttaccaataaagccgccaaggaaatgaaggaacgtttggaaaagatt
tttgcccaagcctgggcccaacaggaatttagccaacggtgggaattgttggggaaatat
gaacaaaaacagttgctttccagggtgtacaaaacagttacgaaacccctctggattggc
actttccacagtctatgttctcgtattctccgctacgacattgataaatatcaggacagc
agtggccgccgttggacaaaacagttttccatttttgatgaaagtgacgtgcaaagtttg
tttaagaccattgtcactaaggatatggatttggacgaaaaacagttcaatcctaagagt
attcgctaccaggtcagtaatgccaaaaacctcgggcaatcaccggagacctatctaagg
gaaaatcccagttataaaggtagggtcattgcggaagtttaccaagcttaccaaaatcaa
ttggccgctaataacgctctagattttgatgatttaattctcatccctacccgtttattt
caacaaaatgaatcagttttaggctactggcaccgaaaatttaaccatattttggtggat
gaataccaagacactaatcgcatccaatatgatttaattcgtctgctgagcaccaatggg
gaagaacggcagtcggagtgggattggcgggggcgttccacttttgtggtgggggatgca
gaccaatctatttacagtttccgcatggcagactttaccatcctgctcaatttccaagag
gattttggcgatcgcctgttggatggggaaacgaccaccatggtcaaactagaggaaaat
taccgttctcgggaaaatatcctccaagcggctaaccatttaattgaacataatagccaa
cggattgacaagatcctcaaggctacccggagtggcggagatgatattatcctttaccag
gcggatgatgaaagggatgagtcccgttttgtgattaataaaattctgagcttaaggaaa
aataacccagaattaaattttggtgattttgctattttatatcgcaccaatgcccaatcc
cgggcctttgaagaacagctattaaataataatattcgctacaatattgtcggtggtttt
cgcttctacgatcgccaggaaattaaagatgccattgcctatctccgggtgttagttaat
ccggcggatacggtcagcttgttgcgtatcatcaatactccccggcggggcatcggtaaa
tccaccattgaaggttttgttaatgcctctaaggaattggacattcccctgtgggaaatt
attaccgacgaaacttcggtgaatactctggccgggcgatcaggtaaaaaaaccctgcaa
tttgcccgcatgctccaggaaatccaaagccaaattggtgagctttctgcgtcggaagcc
ctcagcttagtgttggaaaaatccaattatgtggacgacttaaagcaaaaaggcaccgaa
gaagcggataatcgcctggccaacctgggggaattggacaatgcagtgcgacagtttgaa
gcagaaagtgaagaccctagcctagtggattttttggcttcagcatccctcacttccgac
cttgatgacctggaggaatccggagacgaagtgtccctcatgactctccactctgctaag
ggcctggaatttccagtggtcttcttagtggggttggagcagggcacttgcccccacgcc
cgcagtttaaatgatcctttggatctagaagaggaacgccgtttatgttacgtgggcatt
accagagcccaggaaaatctctttttgacccatgctcgcatgcgttacatctggggttct
ttagaaaccaaaataccgtcccaatttctccaggaattaccaccggatttattggccgat
ggctcaactggtcgtagaactggtcgcaatgctcctgccgccgatcccaagggaccttcc
attgcccaaaaacaagcccgaaaaaaaactggttcccagtccactcaaccggctaaagac
ctaatctggaatgttggcgatcgggtaatgcacaacaattttggagaaggcactgtgacc
cacattttaggcaaaggccataaagctaatttggccatcaaatttcccggcattggtgtg
aaaattattgaccccagtttcgcccctctacgccgcctttga

  All links  
Gene (14)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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