KEGG   Taeniopygia guttata (zebra finch): 100221705
Entry
100221705         CDS       T01082                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase MID2
  KO
K10647  midline 2 [EC:2.3.2.27]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100221705
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100221705
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100221705
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 Pur_ac_phosph_N zf-RING_5 PRY FAD-oxidase_C
Other DBs
NCBI-GeneID: 100221705
NCBI-ProteinID: XP_030128605
Ensembl: ENSTGUG00000004946
Position
4A:14750945..14818078
AA seq 687 aa
METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSSESIEPITAFQCPTCR
YVISLNHRGLEGLKRNVTLQNIIDRFQKASLSGPNSPSESRRERTYRNSPTMSVAGERIA
CQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDAHFRGLTCLEH
ENEKVNMYCVADDQLICALCKLVGRHRDHQVASLSDRFEKLKQTLETNLTNLVKRNSELE
NQMAKLIQICQQVEVNTAMHEAKLMEECDELMEIIRQRKQVIAVKIKETKVMKLRKLAQQ
VANCRQCLERSTVLINQAEHILKENDHARFLQTARNVAERVAMATASSQVLIPDINFNDA
FENFALDFSREKKLLEGLDYLTAPNPPSVREELCTASHDTITVHWISEDEFSVSSYELQY
TIFTGQANFISLYNSMDSWMIVPNIKQNHYTVHGLQSGTRYIFLVKAINQAGSRNSEPAR
LKTNSQPFKLDPKMAHKKLKISNDGLQMEKDESSLKKSHTPERFSGTGCYGAAGNVFIDS
GCHYWEVVVGSSTWYAIGVAYKSAPKNEWIGKNSSSWVFSRCNNNFVVRHNNKEMLVEVH
PQMKRLGVLLDYDNNALSFYDPANSLHLHTFEVSFILPVCPTFTIWNKSLMILSGLPAPD
FIDYPEQQECNCRPQESPYVSGMKACH
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggaaacactggagtcagaattgacctgcccaatctgtctggagttattcgaggacccc
ctcctgctgccctgtgcccacagcctctgcttcagctgtgcccaccgcatcctggtgtcc
agctgctcctccagcgagtccatcgagcccatcaccgccttccagtgccccacgtgccgc
tatgtcatctccctcaaccaccggggcctggagggcctcaagaggaatgtgaccctgcag
aacatcatcgaccgcttccagaaggcgtcgctgagcggccccaactcccccagcgagagc
cgccgcgagaggacctaccgcaacagccctaccatgtccgtggccggcgagaggatcgcc
tgccagttctgcgagcaggatccgccccgcgacgccgtcaagacctgcatcacctgcgag
gtgtcctactgcgaccgctgcctgcgcgccacccaccccaacaagaagcccttcaccagc
caccggctggtggagcccgtgcccgacgcgcacttccgcggactgacgtgcctggagcac
gagaacgagaaggtgaacatgtactgtgtcgctgatgaccagctcatctgtgccttatgt
aaactggtgggccgccaccgggaccaccaagtggcatcgctcagcgatcgcttcgagaag
ctgaagcaaaccctggagacaaatctcaccaacctggttaaacgcaacagcgaactggag
aaccagatggccaagctgatacagatctgccagcaagtggaggtgaacacagccatgcac
gaggccaagctgatggaggagtgtgatgagctgatggagatcatccgccagcgcaagcag
gtcatcgctgtcaagatcaaggagacaaaggtgatgaagctgcggaagctggcccagcag
gttgccaactgccggcagtgcctggagcgctccacggtcctcatcaaccaggccgagcac
atcctgaaggagaacgaccacgcgcggttcctgcagaccgcccgcaacgtggccgagagg
gtcgccatggcaactgcatcctcgcaagtcctgataccagatatcaattttaatgatgcc
tttgaaaactttgctttagatttttccagagagaagaagctgctggagggactggattat
ttaacagccccgaacccaccgtcagtccgtgaggagctctgcacagcctcccacgacacc
atcaccgtgcactggatctcagaggacgagttcagcgtcagctcctacgagctccagtac
accatcttcaccggccaggccaacttcatcagtctctacaactccatggacagctggatg
atcgtccccaacatcaagcagaaccactacacagtgcatgggctgcagagtggcacccgc
tacatcttcctggtgaaggccatcaaccaggcgggcagccggaacagcgagcctgcccgc
ctcaagaccaacagtcagccattcaagctggaccccaagatggctcacaagaagctgaag
atctccaacgacgggctgcagatggagaaggacgagagctccttgaagaagagccacacg
ccggagaggttcagcgggaccggctgctacggcgcggccggcaacgtcttcatcgacagc
ggctgccactactgggaggtggtggtgggatcctccacctggtatgccatcggcgtggcc
tacaagtcagcccccaaaaacgagtggatcgggaagaactcctcttcttgggtcttctcc
cgctgcaacaacaacttcgtggtgcggcacaacaacaaggagatgctggtggaggtgcac
ccgcagatgaagcgcctcggtgtcctcctggactacgacaacaacgcgctctccttctac
gacccggccaactccctgcacctccacaccttcgaagtctccttcatcctgccggtgtgt
cccaccttcaccatctggaacaaatccctgatgatcctctcggggctgcctgccccggat
ttcatcgattaccccgagcagcaggagtgtaactgccggccccaggagtccccgtacgtg
tcaggaatgaaagcctgtcactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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