KEGG   Tolypothrix sp. PCC 7910: HCG51_14825
Entry
HCG51_14825       CDS       T06504                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
toq  Tolypothrix sp. PCC 7910
Pathway
toq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:toq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCG51_14825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:toq03019]
    HCG51_14825
   03009 Ribosome biogenesis [BR:toq03009]
    HCG51_14825
Enzymes [BR:toq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HCG51_14825
Messenger RNA biogenesis [BR:toq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HCG51_14825
Ribosome biogenesis [BR:toq03009]
 Prokaryotic type
  rRNA helicases
   HCG51_14825
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 HEM4 Sigma70_r4 AAA_19 AAA_22 VpsR
Other DBs
NCBI-ProteinID: QIR37859
UniProt: A0A6G9SI70
Position
3733565..3735100
AA seq 511 aa
MNLSFQELGISQERVEQLEKIGFTTPTNIQTQAIPQLLAGRDVVGQSQTGTGKTAAFSLP
ILERLDVSQRAVQALVLTPTRELAMQVHDAIAQFIGDEGLRVLAIYGGQSIDRQILQLRR
GVHMVVGTPGRVIDLLDRGCLKLDQVKWFVLDEADEMLSMGFIDDVIKILSQAPEERQTA
LFSATMPPSIRQLVNKFLRSPATVTVEQPKAAPTKINQVAYLIPRHWTKAKALQPILEME
DPESALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLSRFRNRQVRWVVATD
IAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQIFERH
NRQSWQLLSIPTRAQIEARHINKLQEQVREALTGERLASFLPIVSELIEKYDAQAIAAAA
LQIAYDQTRPAWLSSDIEIPQEENIATPKPKLVKQRRDGSGDRSRSNWSKSDNMGEDERR
STPKPKLRTGRRDASPVNHKLGSSPARESAS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaatctttcgtttcaagaactaggcatttcacaagaacgtgttgaacaactagaaaaa
attggtttcaccacaccaaccaatattcaaactcaagcaattccccaacttctagctgga
cgcgatgttgttggacaatctcaaacaggaactggtaaaaccgcagctttttcgctgcca
attctagagcggctagatgtgagtcaaagagccgtgcaagcactggtgttaacaccaact
cgtgaattagccatgcaggttcacgatgcgatcgcccaatttattggtgatgaaggattg
cgggtgttagcaatctacggtggtcaatctattgatcgccaaattttacaacttcgacgt
ggtgtccacatggttgtgggtactcctggacgggtaattgacttgttagatcgcggctgt
ttgaagctcgatcaagttaagtggtttgttctagatgaagccgatgaaatgttgagcatg
ggctttatcgacgatgtcattaaaatcttgtcccaagcgccagaagaacggcaaacagcg
ctattctcagcgacaatgccgccatcaattcggcaattggtgaacaagtttttgcgatcg
cctgcgacagttaccgtcgaacagccaaaagctgctcctaccaaaattaatcaggtagct
tacctgattcctcgccactggacaaaagccaaagctttacagcccattctggaaatggaa
gatccagaatcagcattgatatttgttcgtaccagacgcaccgcagctgaactcactagt
caactgcaagccgctggacacagtgtcgatgaataccacggtgatttatctcagcaagct
agagaacgcttgctcagccgattccgcaatcgccaagtacgctgggtagtagcaaccgat
attgcagcccgggggttagatgtagatcaactatctcatgtgatcaactacgacttaccc
gatagcgtagaaacctacgtccaccgtattggtcgtactggtcgtgctggtaaagaagga
acagcgatttcactagtacaaccatttgagcgccgcaagcagcaaatctttgaacgtcat
aaccgtcaaagttggcaattgctttcaatccccacccgggcacaaattgaagcgcggcac
atcaataaattgcaagaacaagtcagagaagctttaacaggcgaacgcctagcttcattc
ttacccatagtcagcgaactgatcgaaaaatacgatgctcaagcgatcgcagctgcggca
ttgcaaattgcttatgatcaaactcgtccagcttggttaagttcagacattgaaattccc
caagaagaaaacatcgcgactcctaaacccaagttggtaaaacagcgtcgtgatggttca
ggcgatcgttcccgttctaattggagcaaatcagacaacatgggcgaagacgaaagacgt
tctacccccaagccaaaattgcggacaggtcgtcgtgatgcttctcctgttaaccacaag
ctaggttcttctccagctagagaatctgcttcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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