KEGG   Ursus arctos horribilis (North American brown bear): 113259118
Entry
113259118         CDS       T05909                                 
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
  KO
K13183  ATP-dependent RNA helicase DDX50 [EC:5.6.2.7]
Organism
uah  Ursus arctos horribilis (North American brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:uah03041]
    113259118 (DDX50)
Enzymes [BR:uah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     113259118 (DDX50)
Spliceosome [BR:uah03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    113259118 (DDX50)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C AAA_30
Other DBs
NCBI-GeneID: 113259118
NCBI-ProteinID: XP_026360135
Position
Unknown
AA seq 757 aa
MMPGKLLWGDIMELEAPLEETENQRKERQKGCYEDLNKISRKHITQCWSDRRKSRHHYDS
DEKSETRENGVADILDAPKPKKAKMKEKLNGDTEEGCNNRLSDEFSKSHKSRRKDLSNGD
IDVYEKKSKRVSSLDSSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVSYL
FPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPT
RELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLD
LSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKY
MKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKK
NVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLV
IQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTM
DLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSL
ITSDKGFVTMTLESPEEIQDISCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTE
SERLQAEWHDSDWILSLPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRLGRSGGRSGGR
SGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacccttggaggag
accgagaaccaaaggaaggagaggcaaaagggttgttatgaagatttaaacaagataagc
cgaaaacacattacacaatgctggagtgatagaaggaagtcaaggcaccattatgactca
gatgagaaatcagaaacaagagaaaatggtgttgcagatatcttggatgctcccaagccc
aaaaaagctaaaatgaaagagaagctaaatggagacactgaagaaggatgtaataataga
ctttcagatgaattttctaaatctcataagtcaagaagaaaagatctgtcaaatggagat
attgatgtatatgaaaaaaaatcaaagcgagtgtcatccttagatagttctactcataaa
tcaagtgataataaactagaggagaccctaacacgtgaacagaaagaaggagccttctcc
aatttccctatttctgaagagacaataaagcttctaaaaggtcgaggggtatcatatctc
tttcctattcaagttaagacctttggtcctgtatatgaaggaaaagatttaattgctcaa
gcacggacaggaacaggaaagacattctcttttgccatccccttgattgaaagactccaa
agaaatcaagagacaattaaaaaaagccgctcaccaaaggttcttgttttggctcctaca
agggaactggcaaaccaagtagccaaagacttcaaagatatcactaggaaactcagtgtg
gcatgtttttatggtggaacatcctatcaaagccaaattaatcatattcgaaatggtatt
gacatcttggttgggactcctggtcgtatcaaagaccatttgcagagcggccgattagat
ctttctaaactgcgccatgttgtgcttgatgaagtggatcaaatgttagatttaggtttc
gctgaacaagttgaagatattatccatgaatcctacaaaactgattctgaagacaatcct
cagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatac
atgaaatctagatatgaacaggtcgaccttgttggaaaaatgactcaaaaggctgcaact
actgtggaacatttggctatccagtgccattggtctcagaggccagcagttattggagac
gtccttcaagtctacagtggatctgaagggagggctattattttctgtgagaccaaaaag
aatgtaactgaaatggccatgaacccacacataaaacagaatgcccagtgtttacatggc
gacattgcacaatcacaaagagaaattacactgaaaggcttcagagaaggtagttttaaa
gttttggtggcaaccaatgtggctgcccgtggtttggacattcctgaggttgacctggtg
attcaaagttctcctccccaggatgttgagtcctatattcatcgttctggacgcacaggt
agagctggccggacagggatttgcatctgtttttatcaacccagagaaagaggtcaacta
agatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctacaatg
gatttagttaagtctaaaagcatggatgccatcaggtctctggcttccgtttcttatgct
gctgttgattttttccgaccatcagctcaaagattgatagaagagaaaggggcggtggat
gcattggctgcagcattagcccacatctctggtgcatcaagttttgaaccgcgatctttg
atcacctctgataaggggtttgtcaccatgactctggaaagcccagaagaaatacaggat
atcagctgtgcatggaaagaacttaacagaaaactgagtagtaatgctgtgtcccaaatt
accagaatgtgcctcctaaaaggaaatatgggtgtttgctttgatgttcccacaactgag
tcagaaaggttacaggcagagtggcatgattcagactggatactttcattgccagccaag
ttacctgaaattgaagaatattatgatggaaacacatcttctaactccaggcagaggagt
ggctggtcaagtggccggtccggccggttgggccggtcaggtggtcgatctggtggccgg
tcaggtagacagagtcgacagggaagtcggtcaggcagtcgacaggatggtagaagacga
agtgggaatagaaatcgatcaagaagcgggggccacaaacggagttttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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