KEGG   Variovorax boronicumulans: CKY39_32650
Entry
CKY39_32650       CDS       T05068                                 
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
vbo  Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vbo03009]
    CKY39_32650
Enzymes [BR:vbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CKY39_32650
Ribosome biogenesis [BR:vbo03009]
 Prokaryotic type
  rRNA helicases
   CKY39_32650
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22 CMS1 P-loop_SecA ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ATA57450
UniProt: A0A1E7TYL3
Position
7053373..7054815
AA seq 480 aa
MNSTTSPAGGLQAEPHGFATLALSPQMLANLTQLGYTQMTAIQAAALPPALLGKDLIAQA
KTGSGKTAAFALALLSNLNPRRFAIQAMVLCPTRELADQVTTEIRRLARAEENIKVVTLC
GGVALRGQIASLEHGAHIVVGTPGRIMDHLERENLDLSALNTLVLDEADRMLDMGFFDDI
VKVARQCPKERQTLLFSATYPEGIAKLAQQFMKNPEQITVQAQHEGSKIRQRWYQVKDSE
RLHAVSLLLDHFRPVSTLAFCNTKQQCRDLVDVLQAQGFSAMALFGELEQRERDQVLVQF
ANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDSEIHIHRVGRTGRVGQQGGSEGLALN
LASMNEMGFVGKIELLQGRESEWHPLAELTPAKGAPLTPPMATLQIVGGRKEKIRAGDVL
GALTGDCGYTKDQVGKINVNEFSTYVAVDRGIAEEAARKLGNGRVKGKSVKVRLLTPQST
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaactccaccacctccccagccggcggcctccaggccgaaccccacggctttgccacg
ctggcgctctcgccccagatgctggccaacctcacccagctcggctacacgcagatgacg
gccatccaggccgccgcgctgccgcccgccttgctcggcaaggacctgatcgcccaggcc
aagaccggcagcggcaagaccgccgccttcgcgctggcgctgctgtccaacctgaacccg
cgccgcttcgccatccaggcgatggtgctgtgccccacgcgcgagctggccgaccaggtc
acgaccgagatccgccgcctggcgcgcgccgaagaaaacatcaaggtcgtcacgctgtgc
ggcggcgtggcgctgcgcgggcagatcgccagtctggagcacggcgcgcacatcgtggtg
ggcacgccgggccgcatcatggaccacttggagcgcgagaacctcgacctctcggcgctc
aacacgctggtgctcgacgaggccgaccgcatgctcgacatgggcttcttcgacgacatc
gtgaaggtggcgcgccaatgcccgaaggaacgccagacgctgctgttctcggccacctac
cccgaaggcatcgccaagctcgcgcagcagttcatgaagaaccccgagcagatcacggtg
caggcccagcatgaaggcagcaagatccgccagcgctggtaccaggtgaaagacagcgag
cggctgcacgccgtgagcctgctgctcgaccatttccgtcccgtgagcacgctggccttc
tgcaacaccaagcagcagtgccgcgacctcgtcgacgtgctgcaggcgcagggcttcagc
gcgatggcgctgttcggcgagctggagcagcgcgagcgcgaccaggtgctggtgcagttc
gccaaccgcagctgctcggtgctggtggccaccgacgtggcggcgcgcggcctggacatc
gcgcagctcgaagccgtgatcaacgtcgacgtgacgcccgactccgaaatccacatccac
cgcgtgggccgcaccggccgcgtgggccagcagggcggctcggaaggcctggcgctgaac
ctggccagcatgaacgagatgggcttcgtcggaaagatcgagctgctgcagggccgcgag
tccgaatggcacccattggccgagctcacgcccgccaagggcgcaccgctcacgccgccc
atggccacgctgcagatcgtcggcgggcgcaaggaaaagatccgcgccggcgacgtgctg
ggcgcgctgaccggcgactgcggctacaccaaggaccaggtcggcaagatcaacgtcaac
gagttctcgacctatgtcgcggtggaccgcggcattgccgaagaagccgcccgcaagctc
ggcaacggccgcgtgaagggcaagagcgtcaaggtgcgcctgctgacaccgcagtcgacc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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