KEGG   Weissella confusa: C6P13_09295
Entry
C6P13_09295       CDS       T05951                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
wcf  Weissella confusa
Pathway
wcf03420  Nucleotide excision repair
wcf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C6P13_09295
   03430 Mismatch repair
    C6P13_09295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wcf03400]
    C6P13_09295
Enzymes [BR:wcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C6P13_09295
DNA repair and recombination proteins [BR:wcf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C6P13_09295
   MMR (mismatch excision repair)
    Other MMR factors
     C6P13_09295
SSDB
Motif
Pfam: UvrD_C UvrD_C_2 UvrD-helicase AAA_19 Viral_helicase1 AAA_30 DEAD AAA_16 NACHT SLFN-g3_helicase HMG_CoA_synt_C YAcAr
Other DBs
NCBI-ProteinID: QBZ03436
Position
complement(1943695..1945995)
AA seq 766 aa
MHADQPAEQKRLDKVVVEIDGQLERAKEAYAQAHSETRAVEGNYIANTSINTFEVDDAME
TNAEIQQQRNIVARVTETENIMRKTVDTLTMLRPSPYFGRVDIDEDGDEDTLYIGLASVQ
DKIGDFLVYDWRAPISGIYYNGTLGAVTYPTPMGDQEAELLKKRQFTIEDAQIVNMFDTN
ETVGDEMLQYALGQENDLTMRNIVATIQQEQNQIIRDTTSDLLVVQGVAGSGKTSAILQR
IAFLLFHAREELNSDQIVLFSPNRLFSSYIADVLPSLGERNMRQVTLAEFFSARLQGLQV
QTLFERYEIGHSEATTASLKVREKLESARVVDDLTAFVEQLTPDTLRFDNIYFEDEVFFG
KEAMTRVFAEFSENYSVRERIQMTQKRFMERLERRIDQLVNEDWVLEELNNLDDQQYRDL
LGDELAEQVAEEEEMGYAINIAAKRLLQREFQVVDDALYNMHFFDIYNQYGDFLAYMAEH
SELDTEWWLAKRDRFLRELEYHRIDLEDAAPMLFLRDLITGGGTNKSMFYVFVDEMQDYS
MAQLLYLKHAFPAAKFTVLGDAEQALFRDVETPAALLAKYSQAFKATHPNLITLNKAYRS
TQEIMDFAKALLPDGDNIMAFTRPGGKPKLIVTTADEEEQVIWQAVDELKAEHRTVAILT
KTQDQAEAVARMLRKYPEKFQLLQASDRTRTSNFVVMPIYLAKGLEFDAVIGYDVSQTNY
PDSEATGLLYTLASRAMHALTLISVGPVSGLIRDVQETLDISVLGD
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcatgcagaccaacccgctgaacaaaagcggctcgataaagtggttgtcgaaatcgac
gggcaactcgaacgtgctaaggaagcctatgcgcaagctcactcagaaacacgtgccgtt
gaaggaaattatattgccaatacatcaattaataccttcgaagtcgatgacgcgatggaa
acgaacgccgaaattcaacagcaacgtaacatcgtggcccgtgtaactgaaactgaaaat
attatgcgaaagacggtcgatacattaaccatgctccgacctagtccgtattttggacgt
gtcgatattgatgaagacggtgatgaagataccctatacattggtttggcatcggtacag
gataaaatcggcgatttcctcgtttatgattggcgtgcaccgattagcggaatctactac
aacggaacgctcggtgccgtgacgtatcccacaccaatgggtgaccaagaagccgaattg
ctcaagaagcgtcaatttacgattgaagatgcgcaaatcgtcaacatgtttgataccaat
gaaacggttggcgatgaaatgttgcaatatgctttgggacaagaaaatgatttgaccatg
cgcaatattgtggcgacgattcaacaagaacaaaatcaaattattcgtgacacgaccagt
gatttgctggttgtgcaaggtgtggctggatctggaaagacatctgcaattttgcaacgt
atcgcgtttttgctgttccacgcgcgtgaagagttgaattctgaccaaattgtactgttc
tcacccaaccgtttattctcaagttatattgcggatgttttgccatctttgggtgaacga
aacatgcgccaagttacactggcggaattctttagtgcgcgtctacaaggactgcaggtt
caaacgctctttgaacgttatgaaattggtcacagtgaagcgacgacggctagtcttaag
gttcgtgaaaaattggaaagtgcgcgtgttgttgatgatttaacagcctttgttgaacaa
ctcacaccagatacgttgcgctttgacaacatctactttgaagatgaagtgttctttggt
aaagaagcgatgacacgtgtgtttgctgagttctcagagaattactcggttcgtgaacgt
attcaaatgacacaaaagcgtttcatggagcgtttggaacgtcgtattgatcaattggtc
aacgaagactgggtgttggaagagctgaacaacttggacgaccaacagtatcgtgatttg
ttaggtgacgaactggctgagcaagttgctgaagaagaagagatggggtatgccatcaac
attgcggctaagcgtttattgcaacgtgaattccaggttgttgatgatgcgttgtacaac
atgcacttctttgatatttataatcaatacggcgactttttggcttacatggctgagcat
tctgagttggatactgagtggtggctagcaaagcgtgaccgcttcctccgcgagttggag
taccaccgcattgatttggaagacgcggcaccaatgctgttcttgcgtgatttgattacg
ggtggtggtacgaacaagtcgatgttctacgtcttcgttgatgaaatgcaagactacagt
atggctcaattgttgtacttgaagcacgctttcccagctgctaagtttacggtgttggga
gatgctgaacaggctttgttccgagatgttgagacaccggcagctttgttggctaagtac
agccaggcctttaaggcaacacaccctaatttgattaccttgaacaaggcttaccgttca
acgcaagaaattatggactttgccaaagcattgttgccagatggtgataacatcatggcg
ttcacccgaccaggtgggaagcctaagctaattgtcacgacggcggacgaagaggaacaa
gttatttggcaggctgtcgatgaactcaaagcagaacatcgaacggtcgcaattttgact
aaaacacaagatcaagccgaagctgttgcccgcatgctacgcaagtatcctgagaagttc
caattacttcaagctagtgatcgcacacgaacatctaatttcgtggtgatgccaatctat
ttggccaagggattggaattcgatgcagtcattggatacgacgtttcacaaactaattat
ccagatagtgaagcgaccgggttgttatataccttggcatcacgcgccatgcacgcgttg
acgttgattagcgtggggccagtttcaggtttgattcgcgacgtgcaagagacgttggat
attagtgttttaggcgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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