KEGG   Xenopus laevis (African clawed frog): 108700035
Entry
108700035         CDS       T01010                                 
Name
(RefSeq) tenascin isoform X1
  KO
K06252  tenascin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04510  Focal adhesion
xla04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108700035
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108700035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:xla00536]
    108700035
Glycosaminoglycan binding proteins [BR:xla00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108700035
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_Tenascin EGF_2 EGF Pur_ac_phosph_N hEGF NDNF
Other DBs
NCBI-GeneID: 108700035
NCBI-ProteinID: XP_018088380
UniProt: A0A8J0TQA1
Position
8S:complement(43874961..43950238)
AA seq 1830 aa
MGVPIQVYACLIFLLSLEVNCGLVRKIIRQKRESGLNVTLPEDNQPVVFNHVYNINVPMG
SLCSVDLDPTSTKDNELTPQVGKNYEEQTLNGENQIVFTHRINIPRRACGCASSPDIKDL
MTRLEELEGLVSSLREQCTTGAGCCSSAQGVIETKPYCNGRGNYSSEAKACICEPGWTGL
NCTEVECPGQCNNMGVCVNGACVCNPGFIGNDCRELACPDDCNDQGKCVNGICVCFEGYG
GEDCKEEICPIPCSEHGKCVNGRCVCEENFIGEDCSEPRCPNNCNNRGRCVDNECVCDEP
YTGEDCSELICPNDCFDRGRCVSGVCYCEDGFTGEDCGELACPHNCNNNGRCVNGLCVCD
IGYTGDDCSELACPDNCNNRGRCVNGQCICDEDYTGENCGELRCQNDCNNRGRCVNGQCV
CDDAYIGTDCSDLRCANDCNNRGQCVNGQCVCDEGFIGDDCGELRCPSDCKDRGRCVNGQ
CVCAEGYTGLDCGDLRCPNDCNNRGRCENGQCVCDEEYAGEDCSELRCPNDCNNRGRCVN
GKCVCDTLFMGEDCGELRCPDDCNNRGRCIDGQCVCDEGFTGDNCAELTCLNNCNNQGRC
INGQCVCDEGFTGDFCSEVSPPKDLKVIDVTTKTMNLEWQNKMRVNEYLVSYVPTSPGGL
ELDFRVPGDQTTATIKELEPGVEYFVRVYAILRNQKSIPVSARVSTHLPTADDLRFKSVR
ETFVEVEWDPLDISFDTWQLIFRNTKEENGEITTSLERPVTSFVQTGLAPGETYEVSIQV
VKNKTQGPPLTKVTTTRLDAPSQLEVNDVTDTSALITWVKPLAEIDGISLSYGTGNEPRT
TVELTEDETQYSMSSLRPDTEYEVTLISRRGEMTSSPATETFTTDLDTPKNLRRILNTDT
SITLDWKNSQANVEYYRIKYAPLSGGYHEETIAPRSNDATTKTTLTGLIPGTEYGIGLTA
VKQDKESLPATINAATDLDAPKDLEVTGATETTLDLRWKVPIAKFDHYRLTYTSSTGDKK
EVQVPGNAITHELSRLEPGKEYSLSLVAEKGRHKSKPATVVGRTEEPRELGSLLVSQITW
DSFKLTWIAPEGNYEKFVIQVEDAEHREETKNIVIPGELRYLEVPGLKPETKYQITLHGV
IQGSNTKPLFGETITENIPEVGDLAVSDVTTNNFDLSWTATKDSFEGFVIEVIDTNRLFE
PKTLNVSGNLRTSSVSGLLPKTDYSINLFGIVHGLRTQAISTSATTEPEPEVGNLLVSKI
SSDSFYLSWTADESGFDNFILKIRDAKQQFEPITLTVPGSERSSLVTGLRDGTEYDIELV
GVASGQHSPPLKGVATTALGSPKGLSFSDITENSVKVTWLAPRIKVDKFLITYVPVSGGS
FNTVEVDGSKTQTTLVKLHPGVEYIVSIVSVQGSEESEPSSGTLTTALDSPSGLRVVNVT
ESEALALWQPSLASVDNYVFSYSAKNAPAVTHSISGNTVENDLISLQPFTEYTVKVYAVR
GPLRSAEISTQFTTALDGPRDLSASEIQSESALLTWKPPKSKITGYVLIYESVDGKVKEV
VLGPDTTSYRLLDLSPSAQYIARVQAINGERRSKEIQTIFITIGLLYSYPKDCSQALLNG
ETASGIYTIYANGDQSQPMEVYCDMTVDGGGWIVFLRRTDGSEEFYRNWRTYSAGFGNSN
NEFFMGLENLHKLTSQGQYELRVDLRDHDETVYAVYDKFAVGDAKSRYRLRVDGYSGTAG
DSMTYHNGRSFSTYDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGDTSHSQGVNWFH
WKGHEYSIQFAEMKIRPVSFRNLEGRRKRA
NT seq 5493 nt   +upstreamnt  +downstreamnt
atgggggttcccatacaggtgtatgcctgtctaatctttctcctgagtttggaggtgaac
tgtggtcttgtcagaaaaatcattcgtcagaaaagggagagtggtttaaatgttaccctc
ccagaagataaccagccagttgtttttaaccatgtgtacaatatcaatgttcctatgggt
tccttgtgttctgttgacttggatccaacaagcacaaaagataatgagctcacgccacaa
gttggcaagaactacgaggagcaaactttaaatggtgaaaatcaaattgtttttactcac
cgtatcaacattccacgaagagcatgtggctgtgcatcttcccctgatattaaagacctt
atgaccaggttggaggagttagaaggactggtatcatcccttagagaacagtgtacaaca
ggggctggatgctgttctagtgcacaaggtgttatagagacaaaaccttattgcaatgga
cgtggaaattacagttctgaagcaaaagcatgtatttgtgaacctggatggactgggctc
aactgtacagaagtggaatgtccagggcaatgcaataacatgggtgtctgtgtgaatggt
gcatgtgtgtgtaacccaggtttcattgggaatgactgtagagagttggcttgtccagat
gactgcaatgaccagggcaaatgtgtcaatggcatctgtgtttgctttgaaggctatgga
ggagaagactgcaaggaagagatatgcccaataccctgtagtgagcatggcaaatgtgtg
aatggacgatgtgtgtgtgaggaaaattttataggggaagactgcagtgaacctcgatgc
ccaaacaactgcaacaatcgtggacggtgtgtggataatgagtgtgtctgtgatgaaccc
tacacgggagaggactgcagtgaacttatatgccctaatgactgctttgatcgtggtcga
tgtgtgagcggagtgtgctactgtgaagacggttttactggagaggactgtggtgaactt
gcttgcccacataactgcaacaacaatggccgctgcgtgaatggattgtgtgtctgtgat
attggctatactggagatgactgcagtgaacttgcttgcccggataactgcaataaccgg
gggcgctgtgtgaatgggcaatgcatttgtgatgaggattacacaggggaaaactgtggt
gaactaagatgtcagaatgattgtaataacagagggcgttgtgttaatggtcagtgtgta
tgtgatgatgcatacataggaactgattgttctgatttgagatgtgcaaatgattgcaat
aacaggggccaatgtgttaatggacagtgtgtttgtgatgaaggatttataggggacgac
tgtggtgaacttaggtgccccagtgactgtaaagatagggggcgttgtgttaatggacag
tgtgtgtgtgctgaaggatatacaggcttagactgtggggatcttaggtgtccaaatgac
tgtaataacaggggacgatgtgaaaatgggcagtgtgtttgtgatgaagaatatgcaggt
gaagattgctctgaactaagatgccccaatgactgtaacaacagaggccgttgtgttaat
ggaaagtgcgtgtgtgacactttattcatgggtgaggactgtggtgaattgcgctgccct
gatgattgcaataacaggggacgttgcattgatgggcagtgtgtatgcgatgaaggattc
actggggacaactgtgctgaactaacctgccttaataattgcaataaccaaggccgttgc
atcaatggacagtgtgtctgtgatgaaggtttcactggagacttctgctcagaagtttca
ccaccaaaagacttaaaagtgatagatgtgacaaccaaaaccatgaatcttgaatggcaa
aacaaaatgagagtcaatgaatatcttgtttcatatgttcctaccagccctggagggttg
gagcttgattttagagttccaggggatcaaacaactgccactattaaagagcttgaacca
ggagtggaatattttgttcgtgtatatgcaattctcagaaatcagaagagtattcctgta
agcgcaagagtgtcaactcaccttccaactgcagatgatttaagatttaaatctgtgaga
gaaacatttgttgaggtggaatgggatccattggacatttcttttgatacttggcaactc
atcttcaggaacacaaaagaagagaatggtgagataaccaccagcttagaaagacctgtc
acatcttttgtgcaaactggacttgcaccaggggagacttatgaagtgtctatacaagtt
gttaaaaacaagacccaaggaccacccttgactaaagttaccaccacaagattggatgca
ccaagtcagcttgaagtaaatgatgttactgatacttctgcattgattacctgggttaag
cccctggcagaaattgacggtatttcgctgtcatatggaactgggaatgagccgagaacc
actgtggaactgactgaggatgaaacccagtattcaatgagtagtttacgaccagacact
gagtatgaggtgacccttatctctcgacgtggagaaatgacaagttcccctgcaacagag
actttcacaacagacctggacactccaaagaacctgcgaaggattttaaatacggatacc
agtataactttagactggaaaaatagtcaagcaaatgttgaatattacagaattaaatat
gcaccactctcagggggataccatgaggaaacaatagcacccagaagcaatgacgctacc
accaaaaccacactgacaggtttgattcctggaactgaatatggaatagggctgacagca
gtgaaacaagacaaagaaagtttgccagctacaataaatgctgcaactgaccttgatgct
cccaaggatttggaagtcactggggccactgaaacaaccctagacctaagatggaaagta
cctatagctaagtttgaccactatcgcctcacttatacatctagtactggtgataaaaag
gaagttcaggtcccaggaaatgccatcacccatgaactcagcagacttgaacctggcaaa
gaatacagtctatctcttgttgctgagaaaggaagacacaagagcaagcctgctactgtg
gttggaaggactgaagagccgcgtgaactggggagtttattggtgtcccaaataacctgg
gactctttcaagctcacatggatagccccagaaggcaactatgaaaaatttgttatccag
gttgaggatgctgagcacagagaagaaactaagaacattgtaatacctggagaactccga
tatttagaagtgccaggacttaagccagaaacaaaatatcaaatcacacttcatggtgta
attcagggatctaacactaaacctctctttggtgaaacaattacagaaaacattccagaa
gttggtgatttagctgtctctgatgtcactaccaacaactttgatctttcatggacagca
accaaggattcttttgaaggatttgttattgaagtgattgataccaacaggttgtttgaa
cctaagacattgaatgtctcaggcaacctcagaacatcatctgtctctggattgttacca
aagacagattacagcatcaatctctttggcattgtccatggtctacgtacacaggccata
agtacttctgctaccacagagccagagcctgaggttggcaatcttctagtttccaaaata
tcttcagacagtttctacctatcatggaccgctgatgagagtggttttgacaattttatt
cttaaaataagggatgccaaacagcagtttgagcctataacactaactgtcccaggcagt
gaacgctcttcattggtaacaggactgagagatggtacagagtatgacattgagctggtc
ggcgttgccagtggtcaacactctcctcccttaaaaggagtggcaactacagctctggga
tctcctaaaggactgtcattctctgatataactgagaacagtgttaaagtcacctggtta
gcaccaaggatcaaggtggacaaattcctgatcacatatgtccctgtgtctggaggttct
tttaacacagtggaagtagatgggtctaaaactcagacaactttggtaaaactccatcca
ggtgtagaatatattgtgtctattgtatctgtgcaaggaagtgaggaaagtgagccatct
tctgggactctaaccacagctctggacagtccatctggtcttagggttgtaaacgttaca
gagtcagaagcactggccctctggcaaccatctttggcatctgtggacaattacgtcttc
tcctactctgcaaagaatgcacctgcagtaacacattccatctcaggcaacactgtagag
aatgatttgatcagcctgcagcctttcaccgaatacactgttaaagtctacgctgtcaga
ggccctcttcggagtgctgaaatctctacccaattcaccacagccctggatggtcccaga
gacttgagtgcaagtgagatccagtcagaatcagcactgctcacctggaagcctccaaag
tcaaaaatcactggttatgtgctgatctacgagtctgttgatggaaaggtcaaggaagtt
gttttgggtcctgatactacttcttacagactcctcgatttaagcccatctgcacaatat
attgcaagagttcaagcaataaatggagaaagaagaagcaaggaaatccaaaccatattt
ataacaattgggctactttattcatatccaaaggactgttcccaggctctgcttaatgga
gaaacggcttctggtatatacacaatttacgccaatggggaccagtcccagcccatggag
gtgtactgtgacatgactgttgatggaggtggatggattgtgtttttacgtcgtaccgat
gggtcagaagaattttacagaaactggaggacatacagtgcaggtttcggaaattccaac
aatgaatttttcatgggtctagagaacctgcataaacttacttcccaaggacagtatgag
ctaagagtggaccttcgtgaccacgatgaaactgtatatgcagtctatgataaatttgca
gtgggtgatgcaaagagtcgctaccggctgagggttgatgggtacagtggtacagcagga
gactccatgacttaccacaatgggcgatcattttccacatatgacaaggacaatgattcc
gctattacaaattgcgctttgtcatacaaaggggctttctggtacaagaactgtcacaga
gtaaatctcatgggcagatatggtgacacaagccacagtcagggtgtcaactggttccac
tggaagggacatgaatattcaattcagtttgcagaaatgaaaatacgaccagtaagcttt
agaaatcttgaagggaggaggaagagagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (112)   
   KEGG ORTHOLOGY (1)   
   RefGene (108)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (132)   

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