KEGG   Xenopus tropicalis (tropical clawed frog): 100124935
Entry
100124935         CDS       T01011                                 
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100124935 (stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100124935 (stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100124935 (stx1b)
Membrane trafficking [BR:xtr04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    100124935 (stx1b)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   100124935 (stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   100124935 (stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE AAA_13 Syntaxin_2 Lzipper-MIP1 Relaxase_C GNVR Baculo_PEP_C YtxH Lge1 TolA_bind_tri DUF4658 Acyl-CoA_dh_2 ETRAMP
Other DBs
NCBI-GeneID: 100124935
NCBI-ProteinID: NP_001096346
Xenbase: XB-GENE-5962106
UniProt: A4II22
Position
9:5782592..5815508
AA seq 288 aa
MRDRTQELRSAKDSDDDEEIVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq 867 nt   +upstreamnt  +downstreamnt
atgagggatcggacccaggagctgaggagcgctaaagatagcgacgatgacgaggagatt
gtgcacgtggatcgggaccattttatggatgaattctttgagcaggtggaggagatccgg
ggctgcattgagaagctgtcagaagatgtggagcaggtgaagaagcagcacagtgctatc
ctagctgcacccaaccctgatgagaaaacaaagcaggagctggaggatctcaccgctgac
atcaagaaaacggccaacaaagttcgttccaagttgaaagcaattgaacaaagcattgag
caggaggagggattgaatcgttcttcagctgacctacgtatccgaaaaacccagcattct
actctgtcccgcaagtttgtggaggtgatgacagaatacaatgcaacgcagtccaagtac
agggatcgctgcaaggaccgtatccagagacagctggagatcactggcagaacaacaacc
aatgaagaacttgaggacatgttggagagtggaaagctggcaatattcacagacgatatc
aagatggactcccagatgaccaaacaagctctaaatgagatcgagacaagacacaatgag
atcatcaagctggagaatagtatccgggagctgcacgacatgtttgtagatatggccatg
ctggtggaaagtcagggggagatgattgaccgaattgagtacaacgtggaacactctgtg
gattatgtggaaagagcagtgtctgatactaagaaagctgttaaatatcagagcaaagcg
cgaaggaagaagattatgatcataatctgttgtgtagtactcggtgtagtcttggcttcc
tctattggagggaccctgggactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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