KEGG   Xenopus tropicalis (tropical clawed frog): 100486091
Entry
100486091         CDS       T01011                                 
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
  KO
K15009  SH3 and multiple ankyrin repeat domains protein
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 SAM_1 SAM_2 SH3_2 Ank_5 PDZ_6 PDZ SH3_1 SH3_9 FERM_f0 SAM_PNT
Other DBs
NCBI-GeneID: 100486091
NCBI-ProteinID: XP_031762025
Xenbase: XB-GENE-1013268
UniProt: A0A8J1JYC3
Position
7:complement(110056165..110181851)
AA seq 1939 aa
MPQSPVSSEEERRSISGYPGEESDSDSSREDPVPGGKNNPTSATSNIPKPISLSSVAARR
IKERSMSVPDDSNFSMMVFRIGIPDLHQTKCLRFNPDATIWVAKQQILCTLNESLKDVLN
YGLFQPATNGRDAKFLDEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHT
KAGLKKFVEYVQHGSAEKVARLLDKGLDPNYHDSETGETPLTLASQLEGTVDVIRMLCLG
GAHIDFRSRDGMTALHKSVCARNYNALMTLLDLGGSPNHKDRRGLTPLYHTAMVGGDPRC
CELLLYNRASIGTVDENGWQEIHQACQHGHSQHLEHLLFYGADPASQNASGNTALHICAL
YNKESCARILLYRGASKDIKNHSGQTPFQVAVISGNFELGELIKSHRDSDVVPFQESPSY
AMHRREGGKALSVPHVLHRANSDNSLSLPDWMVFSASTANTVTLQGQKASGGTLRSSSSP
RGARSRSPSRGRHTEESKKQPRGRPSSSGPTKEPPANATTNHRSKRKLYSAVPGRTFVAV
KPYQSQGEGEISLSKGEKVKVLSVGEGGFWEGNAKGRTGWFPSDCVEEIPTKPQEGKQES
RSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFT
PTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNNLMV
KVVMVTRNPEMEDAMRKKVPQQKRVTPPAISLRSKSMTSELEEMVSPWKKKNDYEPPQNT
EKKRTVYQMALNKLDEILAAAQQTISVNESSSPGTLASMGASRAAGKGFFSAEPNFGQHR
VPSAQSMYERPSFLASNPSQAMMLRQKSIGAAEEDKPFLSTPSMKFNRSLSVPSSEDIPP
PPTTSAPDPPYNTAPSPSPRVSPGIRSNFNQSGDVRDVRDVRDVRDVRDVRDVKMYSPSM
RQDTSMYDQQMMEASQKREKMQLYHQDSDQGNEEQIRMGMASPANMRSWRSQAQEIRYFN
LPARAASTAMYVPPKAMHRKGQLVKQVKVENEQFEQQQQQLQQQLQQQQYQSHHQQQQQQ
VTKSHEKSSIPIPTIIIKAPSTSSSGRSSQGSSMEAENQPEPVPIPTLPPSDNMDFTSRF
GAAIVGAARRDREWFNEARRKSALFLSTDEDTEPTPAPRLKHSKSIDEGMFSSEPYMHLP
ANFGIPVNRDITGGYSYQPKTGKSYGSSTTSAFSTVCSTFIPQLQSSSSPLTMSSVNPAG
GVVTPLIHPLTGKILDPSSPLGLALAARERALKESQQHSRNEIEERKSRPCSPRFVEQQK
SSIDSQSSPTHRRWDSASVRKKEIDYKSCMMNTGGERKSDESSGHRSPALLLLQGVEQGK
AWEKRADGQEKIELHVRFMENSTHKEEEEQSKVAMVKVKHERPPPSPTVNHPTVSSTNCM
THESSSKENGLPLLVLPPPAPSIDVDDDFLFTEPLPPPLEFSNSFDKPDSPPGVSSGVNT
LPPPLPPAPPDSGITTALDSTTSSLTSYDSEVANLTQGTPEPKEPHVNFSSVVSSIQIPA
SDTIETVTDSGIEEIDSRSSSDHHLETISSVSTLSSMSGLSTEGTELLDTYITYLDGQAF
GAEKAVLQNKIRTRTFPSRTPGLLRDPITATSTTISISPCTENVFTLTPSQGPSLIAPSE
STKDSQRKSPTLPWEDYSQEKTSPVSAGKPTMITELSSKLQHMSGVSWSRSPESAVAFTP
ERPTSLQRHRIVDDSSASLISSKPVSSMFHNWPKSPQPPSKHPKSVDFDIRPSLRRAPSP
SALPTEHKISPTPRPSSLPILPSAPVYTGVFDLRGSPTAGGESFPSFQTGSRSLSPTHFI
LPPTEKPFASKPVHFWTKYDVADWLDYLNLGEHREHFLDNEIDGSHLPSLTKEDYIDLGV
TRVGHRMNIERALKFFIER
NT seq 5820 nt   +upstreamnt  +downstreamnt
atgccccagagtcctgtgtcaagcgaggaggagaggaggagcatctctggataccctggg
gaagaatcagactcagacagttccagagaggaccctgtccctggagggaaaaacaatccc
acctctgccaccagcaatatccctaagcctatttcattatcttcagtagctgcaagaaga
ataaaagaaagatccatgtcggttccggatgactccaatttcagcatgatggtcttccgt
attggaattcctgacctgcaccaaacaaaatgccttcgattcaatccagatgccacaatc
tgggttgcaaagcagcagatactgtgcacattgaatgagagcctgaaggatgtgctgaac
tatggtctcttccaaccagcgaccaacgggagagatgctaagtttctggatgaggagcga
ctccttcgggaatacccccaatcttttgagaaaggggttccttatttggagttccgctat
aagacaagagtttacaaacagaccaacctcgatgagaagcagctggccaagctccacacc
aaggctggtttgaagaagttcgtggagtatgtgcagcatggttctgctgagaaagtggcc
cgcttgctggacaaaggcctagatcccaactatcatgattcagaaactggagagacccca
ttgacactggcttcgcagcttgagggaactgtggatgtcattaggatgctgtgcctggga
ggtgcccacatcgactttcgatctcgggatggcatgacggctttgcacaagtctgtttgc
gcccgcaactacaatgccctaatgaccctgttggaccttggtggttcaccaaatcacaag
gaccgccgaggcttaactccactttaccatacggctatggttggaggtgatccccggtgc
tgtgaattgttgctctataatcgagcttctattggtacagtggatgaaaatggctggcag
gagatccatcaggcttgccaacatggccactcacaacatctggagcatctgctgttttat
ggtgctgatcctgcttcccagaatgcttcaggcaacactgctctgcatatctgtgctctg
tacaacaaggaaagctgcgctagaattctgctgtaccggggggccagtaaagacatcaaa
aaccacagtgggcagaccccattccaggtcgcggtcatttcaggaaatttcgagctgggg
gagttaataaagagccacagagacagtgatgttgtacccttccaggaatccccctcctat
gccatgcatcgtagggaagggggcaaagcgctgtcggtgccccacgtcctccatcgagca
aacagcgacaacagcctctcactgcctgactggatggtcttctcagcgtctactgccaac
actgtcactctacagggacaaaaggcctcagggggaactctccgcagctccagtagccca
cgtggtgctcgaagccggtcaccttcaagaggccgacacacagaggaatccaagaagcag
ccacgtggacgacccagttccagtggtcctaccaaagagccccctgcaaatgcaaccacc
aatcatcgctccaagcgcaagttgtactcggcggtgccagggcgcacgtttgtggcggtg
aaaccctaccagtcgcaaggagaaggagagatatccctcagcaaaggagaaaaggtcaaa
gttctaagtgtgggagaaggaggattctgggaaggaaatgccaagggtcgcaccggctgg
ttcccatcagactgcgtagaagaaatacccacaaaaccacaggaaggaaaacaagagagc
cggagcgataaagccaagcgcttatttagacactacacggttggatcctatgacagcttt
gatgcccccagtgactacattatcaaagaaaagactgtgctgttgcagaagaaagacagt
gaaggatttggctttgtgctgagaggagcaaaggcacaaacccccattgaagagttcact
ccgacaccggcgtttccggccctgcagtatttggaaagtgtggatgaaggaggcgtggcc
tggagggcgggtcttagaatgggggactttttaattgaggtgaatggtcagaatgtggta
aaagtaggacatcgtcaggttgttaacatgattcggcaaggaggaaacaatctaatggtc
aaagtggtcatggtaaccaggaaccctgaaatggaagatgccatgagaaagaaagtgccg
cagcaaaagcgagttacaccacctgcaatttcccttcggtcaaaatccatgacttcagag
ctggaagaaatggtttcaccctggaaaaagaaaaatgattatgaaccaccccagaataca
gagaagaaaagaacggtgtaccaaatggcactaaataaactggatgaaatcttggctgca
gcccagcagacaatcagtgtcaatgagagctctagtccagggactctggcttcaatggga
gcatccagggctgctggaaagggatttttctctgcagagccaaactttgggcagcacaga
gtaccaagtgcccagtctatgtatgagaggccatcatttcttgcatctaacccctcacag
gccatgatgctacgacaaaagtccattggagccgctgaagaagataagccgttcttgtct
acaccttcaatgaaattcaaccgcagtctctctgttcccagttctgaagacattcctccg
cctcctacaacttctgcccccgatcctccatataacactgcgccctcaccttcaccaaga
gttagtccaggaataagatcaaactttaatcaaagtggagatgtaagagatgtaagagat
gtaagagatgtaagagatgtaagagatgtaagagatgtaaagatgtactccccatctatg
cgtcaggatacaagtatgtatgaccagcaaatgatggaggcatcgcagaaacgagaaaaa
atgcagctttaccaccaagactctgaccaaggaaatgaagaacagattcgcatgggcatg
gcctcaccagcaaatatgagaagctggaggtctcaggcacaagaaatccgttactttaat
cttcctgccagagctgccagtacagcaatgtatgttccaccaaaagcaatgcatcggaaa
ggacaactagtgaaacaggttaaagtggaaaatgaacaatttgaacagcagcagcaacag
ttacagcagcaactgcaacagcagcaataccagtcacatcaccagcagcagcagcagcag
gtcacaaagtcccatgaaaaaagttctattcctatccccaccattattattaaagctccc
tcaactagtagcagtgggcggagcagtcaaggtagtagcatggaggcagaaaaccaacca
gagccagtcccaatcccaactctacccccaagtgataatatggattttactagtcgcttt
ggagcagcaattgttggtgcagcacggcgggaccgtgaatggtttaatgaggcccgacga
aagtcagctctctttttgtccacagatgaagatacagaacccacgccggctccacgacta
aagcattccaaatctattgatgagggtatgttttctagtgaaccatatatgcacctccct
gcaaattttggaattcctgtaaacagagacattactggtggatactcttaccagcccaaa
actggcaagtcatatggttctagtacaaccagcgcttttagcacagtatgttctactttt
ataccacagctgcagtctagttccagtccactaacaatgtcaagtgtgaatccagcaggg
ggagtagtaaccccactaatccatcccttaactggaaaaattttagatcctagctctcca
cttggtcttgctttggcagcaagagaaagagctttgaaagagtctcagcaacatagcaga
aatgaaatagaagaaaggaagtctcgtccgtgctcacctaggtttgtggagcagcaaaag
tcgtcaattgactcccaaagcagccccacacaccgacgttgggattctgcatctgttaga
aaaaaggagattgattacaagtcttgcatgatgaatactggaggggagagaaaatcagat
gagagctctggacaccgatcacctgctcttttgttactgcaaggtgttgaacaaggtaaa
gcttgggagaaaagggctgacgggcaagaaaagatagagcttcatgtgcgtttcatggag
aactccactcataaggaagaagaagaacaaagtaaggtagccatggtcaaagtaaaacat
gagagacctccaccaagccccacagttaatcaccctacagtatctagcacaaactgtatg
acacatgaatccagttccaaagagaatggccttcccttgttagttttaccaccaccagcc
ccatctattgatgttgatgatgattttctgtttacagaacccctcccaccacccttagaa
ttttcaaacagctttgacaagcccgactctcctccaggagtatctagtggagttaataca
ctcccaccacctctgcctccagcccctcctgactccggcattaccactgcattagactct
acaacttctagcctcacttcttatgatagcgaagtagcaaacctaacccaggggacacca
gaacccaaagaacctcatgttaatttttcatctgttgtttcatccattcaaataccagct
tcggacaccatagaaactgtgactgactctggcattgaagagattgacagtcgaagtagc
agtgaccaccatctcgaaactattagtagtgtatctacattatcaagcatgtcaggtctg
tcaacagaaggaactgaacttttggacacctacataacttatctggatgggcaagcattt
ggtgctgaaaaagctgtccttcaaaacaagatccggacccggacattcccaagtagaacc
cctgggctactcagggatcccattactgccacaagtaccaccatatcaatttccccctgc
acagaaaatgtctttactcttactccctcacaggggccatcactcattgctccttcagaa
tccacaaaggacagtcaacgtaaatctcccactcttccatgggaggactattctcaggag
aagacatctcctgtctcagctggtaaacctaccatgatcacagaactaagctcaaaactc
cagcatatgagtggtgtttcatggtccaggtctccagaatcagccgtggcttttacacca
gagagaccaacttctttgcaaaggcacaggatagttgatgattcttcggcatctttgatt
tcttctaaaccagtaagcagtatgtttcacaactggcccaagtctccccagccgccttca
aagcatcccaaaagtgtggactttgatattcgcccttcgctgagacgagcacccagccct
tcagctttacccacagaacacaaaataagcccaacaccccgcccttcgtctctcccaatc
ctgccttcagcccctgtttacacaggggtctttgacctgagaggctccccaacagctgga
ggtgagtcctttcccagcttccaaacaggcagtcggtctctttcccccacgcattttatt
ctaccccctacagagaagccctttgcttccaagcctgttcacttctggacaaaatatgac
gtagccgattggttggactatttaaaccttggtgaacaccgagaacatttcctagacaat
gaaattgatggtagccacttaccttctttaaccaaggaggactacattgacctgggggtg
accagggtcggtcatagaatgaacattgaacgtgctctgaaattcttcatagagaggtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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