KEGG   Yokenella regensburgei: HEC60_13685
Entry
HEC60_13685       CDS       T06519                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
yre  Yokenella regensburgei
Pathway
yre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HEC60_13685 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yre03400]
    HEC60_13685 (recD)
Enzymes [BR:yre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HEC60_13685 (recD)
DNA repair and recombination proteins [BR:yre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HEC60_13685 (recD)
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 Helicase_RecD UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 UvrD-helicase AAA_22 SLFN-g3_helicase AAA_16 nSTAND3 T2SSE AAA_28 UvrD_C PhoH MukB SRP54 TrwB_AAD_bind NTPase_1 ATPase CbiA
Other DBs
NCBI-ProteinID: QIU90281
UniProt: A0A6H0KA68
Position
complement(2823491..2825329)
AA seq 612 aa
MTMRALLLEAAEQKLLRPLDVQFAMMLASPEEEPALLLAAAQLSHDAGEGHVCLPLSRLG
VDNALSGKARELWTRLYDYVDTAEDWGQRLLASEAVSRGERPTPLVLSGERLYLNRMWRN
EQTVARFFNDSNQPIVVDEALVKQTLDGLFPPVEGIDWQKVAAAVALTRRISVISGGPGT
GKTTTVAKLLAALIHLAGGQRCRIRLAAPTGKAAARLTESLGAALRKLPLDESQKAQLPA
EASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFL
GDRDQLASVEAGAVLGDICAWVSKGYSAARAAELNRLSGMNVPAGESSTASGLRDSLCLL
QKSYRFDSHSGIGHLARAVNAGDKRAVRQVLQEGYADISLQPLRTAEEYDEMLAAARHGY
AHYLECLLQQAEPGDVLAAFGEYQLLCALREGPYGVRGLNEQLERRLASQRIITLPKHTR
WYEGRPVMISRNDSALGLFNGDIGIALARGEEGLRVWFPMPDGSIKSFQPSRLPEHDTAW
AMTVHKSQGSEFDHAALILPVQPGPLLTRELVYTAITRAKKRLSLYADESLLTQAITART
ERRSGLAEIFAG
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgacgatgagagcattgttgctggaagcggcagagcagaagcttctgcgcccgctggac
gtccagttcgccatgatgctggcatctcccgaagaagaaccggcgctgctcctggcggcg
gcccagctcagccacgatgccggtgagggacacgtctgcctgccactctcaagacttggc
gttgataacgcactcagcggcaaagcccgcgagctgtggacccggctgtatgactatgtt
gatacagcagaagactggggtcagcgactgctggcaagcgaggcggtaagccgtggcgaa
cgccccacgccgctggtactgagcggagaacgtctgtatctgaaccgtatgtggcgtaac
gagcagaccgtggcgcgcttctttaatgacagtaatcaacctattgtcgttgatgaagct
ctggtgaaacagacgctggacggactattcccgccggtagaaggcattgactggcaaaaa
gtcgcggcggcggtggcgctgacccggcgtatctcggttatctccggcgggcccggtact
ggcaaaaccaccaccgtggcaaaactgctggcggcgcttattcatctggccggagggcaa
cgttgcaggatccggctggcggcaccgaccggtaaggctgcggctcgtctgaccgagtcg
cttggcgctgcgctgcgcaagctgccgctcgacgaaagccaaaaagcgcagctacctgcc
gaagccagcacgctgcaccgtttactcggggcgcagccggggagtcagcggctgcgctat
cacgccggaaacccgctgcacctggatgtgctggtagtggatgaagcctcgatgattgac
ctgccgatgatgtcacggctgattgatgccttaccggctcacgggcgagtgattttcctc
ggcgatcgcgatcagctggcctcggtggaagccggggcggtgctgggcgatatctgcgcc
tgggtaagtaaagggtactcagcggcacgtgcggctgagctgaaccgcctcagcgggatg
aacgtacccgccggagaaagcagcactgccagcggcctgcgtgacagcctgtgcctgctg
caaaagagctaccgctttgacagccattccggtatcggtcatctggctcgtgcggttaac
gcaggcgataagcgagcggttcgtcaggtgctgcaggagggctatgcggacatcagtctg
caaccgctgcgtacggcggaagagtacgatgagatgctggcggcggcccgccacggctac
gcccactatctggagtgtctgctccagcaggcggagccgggagacgtgctcgcggcgttt
ggagaatatcagctgctgtgcgcgttgcgcgaggggccatacggcgttcgtgggcttaat
gagcaactggagcgccggctggcaagccagcggattatcaccctgccaaagcatacccgc
tggtatgaggggcggccggtgatgatttcacgcaatgacagcgccctggggctgttcaac
ggcgatattggtattgcgctggcgcgcggcgaagaggggcttcgcgtctggttcccgatg
cctgacggcagtattaagtcgttccagccaagccgcttgccggagcatgacaccgcctgg
gcgatgacggtgcataaatcacagggatctgagtttgaccacgccgcgcttattttgccg
gttcaacccgggcctctgctgacgcgagagctggtgtataccgccattacccgtgcgaaa
aaacgtttatcgctatatgccgatgagagtttgctgacccaggctattacggcacgaact
gagcgccgcagcgggctggcggagatttttgccgggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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