KEGG   Ziziphus jujuba (Chinese jujube): 107429705
Entry
107429705         CDS       T04794                                 
Name
(RefSeq) cell division control protein 48 homolog C
  KO
K14571  ribosome biogenesis ATPase
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107429705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zju03009]
    107429705
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    107429705
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_14 RuvB_N AAA_16 AAA_2 AAA_22 AAA_5 nSTAND3 RNA_helicase AAA_28 AAA_33 TIP49 AAA_18 ABC_tran IstB_IS21 Viral_helicase1 ATPase_2 AAA_23 NB-ARC Zeta_toxin Rad17 NACHT AAA_17 PduV-EutP Mg_chelatase Bac_DnaA AAA_7 DUF815 TsaE Sigma54_activat TniB AAA_29 Parvo_NS1 SKI AAA_25 ATP-synt_ab AAA_11 tRNA_lig_kinase
Other DBs
NCBI-GeneID: 107429705
NCBI-ProteinID: XP_060669195
Position
12:complement(join(25573937..25574020,25574165..25574299,25574419..25574620,25574752..25574816,25574917..25574982,25575771..25575875,25575996..25576112,25576577..25576726,25577060..25577670,25577844..>25578084))
AA seq 591 aa
NKNDGVSFKDLGGMKELLMEVEDTVIVPLLKHRKLVDKGIELRMGNILFHGPPGCGKTTL
AHAIANESSLPLYKLSPSDIAGGPQEEILQKHFSKAYKTAPSIIFIDEIDAIASKRDNLQ
LQSDRRIVTQLMSCMDECHRHSLLPTSHEDSCYVLVIGATNRPHALEPAVRRPGRFEKEI
LLGVPDENARFDILSRKLKLPPHHHQASSSLDILKIARSTPGFVPTDFDALISQANSIAL
RRAINIRKPRESRNFSEDDGHKLWKETWLDDAIDNLNLTMTDIEAITKVQPSSKKEGSCE
IPNDKWEDIGGLHDIRQELERSLINCIKYPEHSKRCGRAIETGFLLFGPKGCGKTSIAKA
VANEARANFIYIQGPELLDKYVGESERAIRTLFSRARTCSPCIIFFDEMDGLREKREFQK
GRVVQQLVTQLLTELDGRNKRDGVFVIGATNRIDHIDEAFLRPGRFCKRLYVPLPGPDER
GMILKALGKERPIDPTVNLIDIAKMEACENFNGADLYHLMREATLAALDEAIANSSTSDT
SQRTVKVKHFEQVVTKISPSVSKMEKKLQWRLAKRFMACNLQRNTTEGHSE
NT seq 1776 nt   +upstreamnt  +downstreamnt
aataaaaatgatggtgtgagttttaaggatctgggaggtatgaaggagttgttgatggag
gtagaggacacggtgattgtgcctcttcttaaacataggaagctggtagacaagggtata
gagttaaggatgggcaatattctttttcatggtcctcctggttgcggcaagaccactttg
gctcatgccattgccaatgagtcttctttacctctttataagctttccccttctgatata
gcaggtggacctcaagaagaaatccttcaaaaacatttctcaaaagcttacaagacagcc
ccttcaatcatatttattgatgagatcgatgcaatagcttcaaaacgagataatttacaa
ctacaatctgaccgaaggattgtgacacaactgatgagttgcatggatgaatgccatagg
cattccctgttgcctactagtcatgaagattcttgctatgttctcgtgattggtgcgacc
aataggcctcatgctcttgaacctgcagtcagaagacctggtagattcgaaaaggagatt
cttcttggtgtcccggatgaaaatgctaggtttgacattctttctcgcaagcttaagcta
cctcctcatcatcatcaagcctcctcctccttggacattcttaagatagccaggtctact
ccaggttttgttcccactgattttgatgccctgatttctcaagctaattccattgcctta
cggagagctataaacattagaaagcctagggaatctagaaatttttctgaagacgatggc
cataagttgtggaaggaaacttggttggatgatgctattgacaatctcaaccttaccatg
actgatatcgaggcaattacaaaggttcaaccctcgtctaaaaaagaaggttcttgtgag
attcctaatgacaaatgggaagatattggtgggttgcatgatataaggcaggaattggaa
cgatctcttattaattgtatcaagtatcccgagcatagtaagagatgtggaagggccatc
gaaacaggatttttattatttggacctaagggctgtggtaagacatcaattgcaaaggct
gttgctaatgaagcaagagctaatttcatttatatccagggtccagaacttttggataaa
tatgttggagaaagtgaaagggccatccgaaccttgtttagtcgtgcaaggacatgttca
ccatgcataattttctttgatgagatggatggcttgagagaaaagagagagttccagaag
ggacgagtggttcagcagctagtgactcagttacttacggagttagatggaagaaacaaa
cgggatggtgtatttgtaattggtgccacaaacagaatcgatcatatagatgaggccttt
ctgcggccaggtagattctgtaaacgtctttatgtaccactgcccggtccagatgaacgt
ggaatgatcttaaaagctcttggaaaggagagaccaatagatcctactgtgaatttgatt
gacattgcaaagatggaagcttgtgagaattttaatggggctgacctttatcatctgatg
cgcgaagctacacttgctgctctagatgaagcaatagctaacagcagtacttcggataca
tctcaacggacagtcaaagtgaaacactttgagcaagttgtcactaaaatctccccttct
gtgtcaaaaatggaaaaaaagctgcagtggaggttggctaagaggttcatggcgtgtaac
ctgcaaagaaacacaacagagggacattcggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (66)   

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