KEGG   Apaloderma vittatum (bar-tailed trogon): 104279809
Entry
104279809         CDS       T08559                                 
Name
(RefSeq) interstitial collagenase-like
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:avit00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    104279809
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:avit01002]
    104279809
Enzymes [BR:avit01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     104279809
Peptidases and inhibitors [BR:avit01002]
 Metallo peptidases
  Family M10
   104279809
SSDB
Motif
Pfam: Hemopexin Peptidase_M10 Reprolysin_3 Reprolysin_5 Reprolysin_4 Peptidase_M54 DUF4953 Peptidase_M66 Peptidase_M57 Reprolysin_2 Metallopep Astacin
Other DBs
NCBI-GeneID: 104279809
NCBI-ProteinID: XP_009875526
Position
Unknown
AA seq 261 aa
YPLGYNLFIVIAHELGHSLGLSHSNDPGALMYPTYAYTDPKEFLLPQDDIDGIQAIYGQS
NVAMQPTGPVTPKSCDPNLTFDAITTLRGEIIFFKGRYMLRKHPARAGTELNFISLFWPQ
LPSGIQAAYENVNRDEVLLFKEGKYWLVRGYDVARGYPKPIYHLGFPKTIKRVNAAYSDE
VTGKTYFFVADRYWRYDENKKSMDPGYPKKIVSHFGKIGRVDAAFQKDGYVYFFHGTTQF
QFDPRAKRIVGIMKSISWFNC
NT seq 786 nt   +upstreamnt  +downstreamnt
tatcctctaggctacaatttgttcattgttattgcccatgagcttggccactcgctgggt
ctgtctcattcaaatgatcctggagcactgatgtatccaacttacgcctacacggacccc
aaggaattccttcttcctcaggatgacattgatggcattcaagccatttatgggcagtct
aatgttgctatgcagccaacaggacctgtaactccaaaatcttgtgacccaaatttgaca
tttgatgctattactactctacgtggagaaataatattcttcaagggcaggtatatgctg
cgcaaacatcctgcaagggcggggacggagctcaactttatctcgctgttctggccacag
ttaccatcaggaattcaagctgcttatgaaaacgttaatagagatgaagttttacttttt
aaagagggtaaatattggcttgtcaggggatatgacgttgcacgtggctatcctaaacca
atttatcatctggggttcccaaagactattaaaagagttaatgctgcttacagcgatgaa
gtcacaggaaaaacatacttctttgtagctgacagatactggagatatgatgaaaacaag
aaatctatggatcctggttatcccaagaaaatagtctcccactttggaaaaattggccgg
gttgatgctgctttccagaaagatggctatgtctacttcttccatggaacaactcagttc
cagtttgatcctcgtgctaaacggattgtcggaataatgaagagcatcagctggtttaat
tgttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (16)   

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