KEGG   Cynara cardunculus var. scolymus (artichoke): 112524135
Entry
112524135         CDS       T05604                                 
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial isoform X1
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ccav03110]
    112524135
Chaperones and folding catalysts [BR:ccav03110]
 Heat shock proteins
  HSP100
   112524135
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_22 AAA_5 Mg_chelatase RuvB_N Sigma54_activat T2SSE AAA_16 ABC_tran IstB_IS21 AAA_18 AAA_28 nSTAND3 TsaE DEAD Sigma54_activ_2 NACHT AAA_7 AAA_33 AAA_14 ResIII AAA_29 RNA_helicase AAA_19 AAA_24
Other DBs
NCBI-GeneID: 112524135
NCBI-ProteinID: XP_024989572
Position
LG 13:16922857..16930957
AA seq 601 aa
MAAAALRSKSSKATASLSSISQFKYFILTHRMHAGRIPNFPITSSIPTTSKLDEYLPHYH
HQHQSFKPFSLPAEVVDKGCGFSKSSNNKRRLITLSGSGGYGDPPEVWQPPGDGIVPQPG
LKVVQVSGGDDPSTGGFGSDSGDGSWGGSSLGISFPTPKEICKGLDKFVIGQDRAKKVLA
VAVYNHYKRISIDSTKKPAGHSRNDKKNVMDEDAVELEKSNILLMGPTGSGKTLLAKTLA
RLVNVPFVIADATTLTQAGYVGEDVESILYKLLTKHALCFLRQRQDLLTSSTTLPSGRIY
WVADYNVAAAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEGTVVNVPEKG
ARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTTAS
VTSSLLETVESSDLIAYGLIPEFVGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLF
QMNDVKLHYTESALRLIARKAITKNTGARGLRAILENILMDAMYEIPDARTGKDIIDAVV
VDEEAVGVEGQGCGAKILHGEGALDCYLSQHTVKDLEMGVGRAADGGAEAEVEAELPSVA
L
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggctgctgctgccctgagatcgaagtcatccaaagccaccgcttccttatcatctatc
tcacaatttaaatacttcattttaactcaccgtatgcacgctggtcgtatacccaatttc
ccaatcactagttcaataccaacaacaagcaaattagatgaatatttgcctcactatcac
catcaacaccaatcttttaaacccttttcactccccgctgaagttgttgataagggatgc
ggtttttccaagagtagtaataataaaaggagattgattactttgtctggtagtggtggt
tatggagatccacctgaggtttggcagcctcctggagatgggattgttcctcagccgggt
cttaaggtggtccaggtatccggtggagatgacccaagtaccggtgggtttggatccgat
tctggagatgggagttggggagggtctagtttgggtattagtttcccgactcccaaagag
atttgtaaagggcttgataagtttgtcattggtcaagacagagctaaaaaggtgcttgcg
gtggctgtttacaatcactacaagaggatctctattgacagtacaaagaagcctgcagga
cattcgagaaatgacaagaaaaatgtcatggatgaggacgcagtagaacttgagaaaagt
aatatacttctaatggggccaactggttcagggaagacattacttgcaaaaacactggca
cgcttggtgaatgttccctttgttattgcagatgctactacacttacccaggcaggctat
gttggggaagatgtggaatccattctatacaagcttcttactaaacatgctctctgtttc
ttgagacagaggcaagatctgcttacatcctctacgaccctaccttcaggcagaatatac
tgggttgctgactacaatgtagcagctgctcagcagggcattgtgtatatagatgaagtt
gacaagattacgaagaaggctgagagtgtcaacattagccgagatgtttcaggtgagggc
gtgcagcaggcattactaaagatgctagaagggactgtagtcaacgtccctgagaagggt
gcacggaaacatcctagaggagacaacattcagattgataccaaagatatcctgtttatt
tgtgggggtgcctttatagatctggaaaagacaatttcagaaagacgccaggactcttcc
atcgggtttggggcacccgttcgtgcaaacatgagaactggtggtgttacaactgcttct
gtgacttcatctttgttggagactgttgaaagtagcgatcttattgcttatggtctcata
cctgaattcgttggacggtttccaattcttgtcagcttattagctcttacagaggatcag
cttgttcaggtgctaactgagcccaagaatgcattaggcaaacaatacaaaaagttattt
cagatgaacgatgttaagctgcattatacggaaagtgctttgagattaatcgcgagaaaa
gcaataactaagaacactggtgctcggggtttgagggccatattggagaacatattgatg
gatgccatgtatgagattcctgatgcaagaacaggtaaagatataattgatgctgtggtg
gttgatgaggaggcagttggggttgagggacagggttgtggtgctaaaatcctccatggt
gaaggtgcactcgattgttacctgtcgcaacatactgtaaaagatttagagatgggcgtg
ggaagggcggcagatggcggagccgaggcggaggtggaggcagagttgccttctgttgct
ttgtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (27)   
   Pfam (27)   
All databases (38)   

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