KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117035480
Entry
117035480         CDS       T07722                                 
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
  KO
K03063  26S proteasome regulatory subunit T3
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03050  Proteasome
rfq05010  Alzheimer disease
rfq05012  Parkinson disease
rfq05014  Amyotrophic lateral sclerosis
rfq05016  Huntington disease
rfq05017  Spinocerebellar ataxia
rfq05020  Prion disease
rfq05022  Pathways of neurodegeneration - multiple diseases
rfq05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    117035480 (PSMC4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    117035480 (PSMC4)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    117035480 (PSMC4)
   05012 Parkinson disease
    117035480 (PSMC4)
   05014 Amyotrophic lateral sclerosis
    117035480 (PSMC4)
   05016 Huntington disease
    117035480 (PSMC4)
   05017 Spinocerebellar ataxia
    117035480 (PSMC4)
   05020 Prion disease
    117035480 (PSMC4)
   05022 Pathways of neurodegeneration - multiple diseases
    117035480 (PSMC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rfq03051]
    117035480 (PSMC4)
Proteasome [BR:rfq03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     117035480 (PSMC4)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_5 AAA_2 AAA_lid_3 AAA_16 RuvB_N AAA_22 nSTAND3 DUF815 NPHP3_N AAA_28 RNA_helicase Mg_chelatase AAA_14 TIP49 NTPase_1 ATPase_2 NACHT AAA_3 IstB_IS21 AAA_7 TsaE AAA_18 AAA_33 Parvo_NS1 AAA_lid_PRS2_C AAA_17 AAA_25 NB-ARC AAA_24 ABC_tran DUF3450
Other DBs
NCBI-GeneID: 117035480
NCBI-ProteinID: XP_032985238
Ensembl: ENSRFEG00010022017
UniProt: A0A671GB17
Position
15:38876795..38883144
AA seq 418 aa
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggaggagataggcatcctggtggagaaagctcaggatgagatcccagcactgtcagtg
tcacggccccagactggcctgtccttcctggggcctgagcctgaggacctggaggacctg
tacagccgctacaagaagctgcagcaagagctggagttcctagaagtgcaggaggagtac
atcaaggatgagcaaaagaacctaaagaaggaattcctccacgcccaggaggaggtgaag
cgaatccagagcatcccgctggttattgggcagtttctggaggctgtggatcagaataca
gccatagtgggctccaccacaggctccaactactacgtccgcatcctgagcaccattgat
cgggagctgctcaagcccaatgcgtcggtggccctgcacaagcacagcaatgccctggtg
gatgtgctgcctcccgaggccgacagcagtatcatgatgctcacctcagaccagaagcca
gatgtgatgtatgcggacatcgggggcatggacatccagaagcaggaagtgcgggaggcc
gtggagcttccgcttacgcactttgagctctacaagcagatcggcatcgatcctccccga
ggtgtcctcatgtacggcccgcctggctgtgggaagaccatgctggcaaaggccgtggct
caccacaccacggctgcatttatccgggtcgtgggctccgagtttgtgcagaagtacctg
ggcgagggcccccgcatggtccgcgatgtgttccgcctggccaaggagaacgcacctgcc
atcatcttcatagatgagatcgacgccatcgccaccaagagattcgatgcccagacaggg
gctgacagggaggttcagaggatcctgctggagctgctaaatcaaatggatggattcgac
cagaacgtcaacgtcaaggtgatcatggccacgaacagagcagataccctggatcctgcc
ctactgcggccaggacgccttgaccgtaaaatcgaatttccactccctgaccgccgccag
aagaggttgattttctccactatcaccagcaaaatgaatctctctgaggaggttgacttg
gaagattatgtggccaggccagataagatttcaggagctgatattaactccatctgtcag
gagagtggaatgttggctgtccgagagaaccgctacatcgttctggccaaggacttcgag
aaagcgtacaagacagtcatcaagaaggatgagcaggagcatgagttttacaagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (33)   
   Pfam (33)   
All databases (39)   

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