KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112068920
Entry
112068920         CDS       T05762                                 
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like isoform X1
  KO
K08727  nucleotide-binding oligomerization domain-containing protein 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04621  NOD-like receptor signaling pathway
salp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:salp00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    112068920
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112068920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:salp04054]
    112068920
Pattern recognition receptors [BR:salp04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   112068920
SSDB
Motif
Pfam: NACHT NLRC4_HD2 CARD NOD2_WH LRR_4 AAA_16 NPHP3_N AAA_22 AAA_18 ATPase AAA_30 AAA_29 Sigma54_activat RNA_helicase NTPase_1 AAA_7
Other DBs
NCBI-GeneID: 112068920
NCBI-ProteinID: XP_023991917
Position
Unknown
AA seq 903 aa
MHIMGSSAEEARTGLTGHVSTVQLFTLHRELLFSQVKSTQCILDNLLQSGFLCIEDTEII
QRSATKTXQVRKILELVQSKGEQACEYFLYILYKVYDAYIDLQPWLKEINYQPPDFIRDI
PVKNTDPISRYCEKLRHELGRDTRFIASYTKREETLLEELYTDTLMELLNERNESLGHLE
GLEQLLGEQGVFNPQAETVLITGDAGVGKSILLQKLQRLWSKRELEQTDAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPEKVLFTFDGYDEIQADLDLXN
XPEVVSPEEXXHPLLVLINLLCGKLLNGSRKVLTARTGTEVQSRVIRKRVALRGFSPAHL
QTYTNLHFQDQEHRDLVSVQLDASPHLCGLCSXPLFCWIVFKSFKHLRSVYDDFELPEAC
MTLTNIFLLLSEIFFSRGAAPPPGLLKRNTRCPADTFRAGLRPLTAFSKLALLGXERGGF
VFDQEEVASCGLTEEDLQVGFLRPVSRYDACGNPSTFEFFHLTLQSFLAAFSLVLDEHAS
VGNILKFFTECSRRDNTSCLSFVFPCIGGSSKPRGKDPFKTNEHLQYANLFLCGLLSKTN
TGLLEHMVPPALLKRKRAVLKSYLSTSVRSHLRGLPLHSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSVEVLAEELIKHRVVEVLGLYNNHITDIGAKLIAHI
IEECPKLRVVKVGSNKFTSVGGRYLASAIQKSTSIFDVGMWENSIGDEGARAFAEALRNH
PSLTNLCLSANGITSEGGRSLAKALKDNRRLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLW
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgcatattatgggctccagtgccgaagaagcccgtactggactaacgggccatgtgtcc
actgtccaactgttcaccttgcaccgtgagctactgttctcccaggtgaagagcacgcag
tgcattctggataacctcctacaaagtggctttctgtgtattgaggacacagaaatcatc
cagcgctcagccaccaagacasaccaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattctctacaaagtttatgacgcatacata
gacctccaaccatggcttaaagagatcaactaccagccaccagacttcatacgggacata
ccagtgaagaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgggc
cgagacacacgcttcattgcatcctacaccaagcgagaggaaaccctgctggaggagctc
tatacagacaccctaatggagctcctgaatgagcgcaatgagagcctgggccacctggag
ggtctggagcagctcctgggagagcagggtgtctttaacccacaggcagagacggtgctc
atcacgggggacgctggggtgggcaagtccatcctcctccagaagctccagaggctgtgg
tccaagagggagctggaacagacagacgctatgttcttcttcaagttccgctgtaggatg
ttcagcacattcaaggagacagacgagatctcactcagggacctgcttttcaaatacaac
tgctaccccgaccaagatgcggataatgaggtgttcagctacatcctccgcttccccgaa
aaggttctctttacgtttgacggctatgatgagatccaggctgatctggacctgmygaac
wtgcctgaggtggtttctccagaggagaygartcacccrcttctmgtgctcattaacctg
ctctgtgggaagctgctcaatggttcccggaaggtcctgacggctcggacaggcaccgag
gtccagagcagggtgatccggaagagggtggcactgcgtgggttctctccggcccacctt
caaacctacaccaacctgcacttccaagaccaagagcaccgggacttggtctcagtccag
ctggatgccagcccccacctctgtggcctctgctccarccckctcttctgctggatcgtc
ttcaagagctttaaacacctgcgctcagtctacgacgactttgagctgccagaggcttgc
atgackctcactaacatattccttctgctgtctgaaatcttcttcagccggggggccgct
cccccaccgggcctcctgaagagaaacaccaggtgccccgctgataccttcagggcaggg
ctgaggccyctgacagccttctccaagctggctctgctgggcarggagagaggaggcttt
gtgttcgaccaggaggaggtggcctcctgtggcctgactgaggaggaccttcaggtgggt
ttcctccgaccagtcagccgctacgatgcctgtggaaacccttctacgtttgagttcttt
cacctcaccctgcagtccttcttggctgcattctccctggttctggacgaacatgccagc
gtaggcaacatcctcaagttcttcaccgagtgcagcaggagggacaacacatcttgttta
tcatttgtctttccctgcatcggtggctcctccaaacccaggggaaaggatccgttcaag
accaacgagcatctccagtacgccaacctcttcctgtgtggactgctgtctaagaccaac
accggcctactggagcacatggttcctccagcgctactgaagaggaagcgggcygtcctc
aagtcctacctgtccaccagcgtgaggtcccacctccgcggcctgccactccacagcaca
gagcaggagggcagcaaggtgcatgtccttcccaacttcctgtggatgctgcgttgcatc
ttcgagacaggaagtaaagaggtggcccagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgccctcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaagatgaccgtggtgagattgtgtgtcaatcag
atctcagacagcagcgtcgaggtactggctgaggagcttatcaaacacagagtagtggag
gttctgggactttacaataatcacatcacggacatcggagccaagctaattgctcatatc
attgaggaatgtcctaagttaagagtcgtcaaggttggcagcaacaagttcaccagtgtg
ggtggcaggtacctggccagtgccattcagaagagcacatctatctttgacgtgggaatg
tgggagaacagcattggtgatgaaggagcaagagcattcgcagaggccctgaggaatcac
ccaagtcttaccaacctctgtctctcagccaatggcatcacttcagaaggtgggcggagc
ttggccaaagcactgaaagacaatagaaggctccgaattttctggttggtgcaaaatgag
ttgtcagatgatgtagcaccagacatggcagaactgatcagatccaacacgggtctatct
cacctctggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (22)   

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