KEGG   Sinocyclocheilus grahami (golden-line barbel): 107552963
Entry
107552963         CDS       T04918                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107552963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107552963
Enzymes [BR:sgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107552963
Spliceosome [BR:sgh03041]
 Complex C
  Other components
   Step II factors
    107552963
SSDB
Motif
Pfam: HA2_C HA2_N AAA_22 AAA_19 nSTAND3 T2SSE AAA_16 AAA_7 ATPase PhoH DEAD ATPase_2 SRP54
Other DBs
NCBI-GeneID: 107552963
NCBI-ProteinID: XP_016090510
Position
Unknown
AA seq 874 aa
MEDDSSLHRLEGSDPSVQVGGLIVKKKSASTEQHVFRAPAPRTSLLGLDLLAAQKRKERE
GKESLDDQPKKSKVSSYKDWEEGQSDSGSDDENQEDGDSRNGKKERKYRVTGSETPSNPG
GVSEEFKQKHQQREKDRREHGVYASSKEDKSRDKDRSRDRDRDHDRYRDRDRRRDRDERE
SSRGRGSSSSRSERGDGSVRSERSQRDGSSDRMSRGTRRDEPESPHNRSKDLATPSRSSW
DEDDSGYSSSRHSHWESPSPAPSHREYDRSERSHRSVRDSERRDRSSKPQYPAETPLPTP
SYKYNEWANDRKHLGSTPRLSRGKGDKREDREDGILFTNEEEKEQWEEDQRQADRDWYMM
DEGFDEFHNPLTSSSEEYVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVVQ
RLEVDEDFEEDNATRVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDMAIISRKGSQ
LVRRHREQKERKKAQHKHWELAGTKLGDIMGIKKTEEDGSDGKTVGEDGNVDYRAEQKFA
DHMKEKNEASSEFAKKKTLLQQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLT
QYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGAQHLMNLNQVTSDQIV
ERLEDLENAPALAVLPIYSQLPSDLQAKIFQKFVSVHFRLYTQSAFKNEMLTTTIPEIQR
TNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVE
FPLDPALSKMLIVSCDMGCSADILIIVSMLSVPSIFYRPKGREEESDQVREKFSVPESDH
LTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVR
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggaagatgattcctccctgcatcgactggaagggagtgaccccagtgttcaggtcggg
gggctgatagtgaagaagaagagtgcttcaacagaacagcatgtgttcagagctcccgct
ccacgaacctcgctcctgggcctcgatctgctggccgcacagaaacgcaaggagcgcgag
ggcaaggaaagtctggatgatcaacccaagaaatccaaggtgtcgtcctacaaggactgg
gaggagggacaaagtgattcggggtctgatgatgaaaatcaagaagatggcgatagcagg
aatgggaaaaaggaaaggaagtaccgtgtcactggctcagaaaccccctcaaacccagga
ggggttagtgaggagttcaagcagaagcatcaacagagggagaaggacagacgtgagcat
ggggtttatgcgtcctccaaagaagacaagagcagagacaaagaccgatccagagacagg
gacagagaccacgatcgctaccgtgaccgagacagaaggagagaccgagatgaacgggaa
agcagccgcggccgtggctccagcagcagtcgctctgagcgcggtgatggcagcgtgagg
agtgaacgctcgcagagggacggctcatccgaccgcatgagtcgcggtactcgccgcgat
gagcccgaatcaccccacaacagatccaaagatctggccactccatcacgctccagctgg
gatgaggatgacagtggatattccagctcacgccactctcactgggagagcccgtctcct
gccccgtcacaccgggagtacgaccgctccgagcgcagccatcgctcagtccgtgacagt
gagaggagagacaggtcaagtaaacctcaatatccagcagaaactcctctaccaacccca
tcatataagtacaacgagtgggccaatgacaggaagcaccttggctccaccccacgcctg
tcccgaggaaaaggtgataagagggaggatagagaggacggcatcctatttactaatgaa
gaagagaaggaacagtgggaggaagatcagcggcaagctgatcgagactggtacatgatg
gatgaaggttttgatgagttccacaaccccttgacatccagttcagaagaatatgtgaag
aagagggagcagatcctacagaagcagacccagaaacgcatctcagcgcagaaacggcaa
atcaatgaggataacgaacgctgggagaccaaccgcatgctcaccagtggagtggttcag
cgtttggaggtggatgaggacttcgaggaagacaatgcaaccagagtgcatctgcttgtc
cataacctcgtgccacccttcctggacgggaggatagtcttcacgaagcagcctgagccg
gtcattccagtgaaagacgcgacctcagacatggccatcatctcccgcaagggcagtcag
ctggtccgacgacaccgagagcagaaagaaagaaagaaggcacaacacaaacactgggag
ctcgctggcaccaaactgggagacatcatgggaatcaagaaaaccgaggaggatggatca
gatggaaaaactgttggagaagatggaaatgtggactacagagcggagcagaagtttgct
gaccacatgaaggagaagaatgaagcgagcagtgagtttgccaagaagaagactctatta
cagcagaggcagtatctgcccatctttgctgttcgccagcagctgctcaacatcatcagg
gataacaatattgtgattgtggtgggggaaacgggcagtggtaagacgactcagctgacg
cagtatctacatgaggatggttacaccagctatggcatggtgggctgcacacagccccgc
agagtggcagccatgagcgtagccaagagagtcagcgaagaaatgaacagtaacctggga
gaagaggttggtgcccaacatcttatgaacctgaaccaagtgacgtcagatcagattgtg
gagcgactagaggatctagagaacgctccggccctagcagtgctgcccatctactcccag
ctgccctctgacctgcaggccaagatcttccagaagtttgtgtcggttcacttcaggtta
tacactcagagtgccttcaagaatgaaatgctcaccaccactatcccagagatccagcgc
actaacctggccaatgttgtgcttctgctcaagtcactgggagttcaagatctcctgctc
ttccacttcatggacccgccgcctgaagacaacatgctgaactccatgtaccagctgtgg
atcttgggagcgcttgacaacacaggcgctctgacgcccaccgggcggctcatggtggag
tttcctctggatccggctctgtctaaaatgctgatcgtgtcatgtgacatgggctgcagt
gccgacattctcatcatcgtctcgatgttgtctgtgccatcaatcttctaccgaccaaag
ggtcgagaggaggagagtgaccaggtgagagagaagttctcggtgcctgagagtgatcac
ctgacctacctcaacgtttacctgcagtggaagaacaacaattattccagcatctggtgt
aacgatcacttcatccacaccaaagctatgagaaaggtacgttaa

DBGET integrated database retrieval system