KEGG   Saccharolobus islandicus Y.G.57.14: YG5714_1802
Entry
YG5714_1802       CDS       T00901                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
siy  Saccharolobus islandicus Y.G.57.14
Pathway
siy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:siy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    YG5714_1802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:siy03019]
    YG5714_1802
   03009 Ribosome biogenesis [BR:siy03009]
    YG5714_1802
   04131 Membrane trafficking [BR:siy04131]
    YG5714_1802
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:siy04147]
    YG5714_1802
Messenger RNA biogenesis [BR:siy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     YG5714_1802
Ribosome biogenesis [BR:siy03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    YG5714_1802
Membrane trafficking [BR:siy04131]
 SNARE
  SNARE associated proteins
   Others
    YG5714_1802
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    YG5714_1802
Exosome [BR:siy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   YG5714_1802
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_2 AAA_5 AAA_22 TIP49 AAA_14 AAA_33 Vps4_C nSTAND3 AAA_28 AAA_18 RNA_helicase Mg_chelatase AAA_lid_PRS2_C IstB_IS21 ABC_tran NACHT ATPase_2 DUF815 TsaE AAA_3 NPHP3_N AAA_24 AAA_17 AAA_7 Parvo_NS1 nSTAND_NTPase5 AAA_25 Molydop_binding Zeta_toxin NB-ARC AAA_11 ATP-synt_ab PhoH ATPase
Other DBs
NCBI-ProteinID: ACP46059
UniProt: C3N765
Position
1619625..1621904
AA seq 759 aa
MRKTYFKRFGKMINMSQQLKLRVVEARQRDVGRKVARITDYTMSRLGIENGDYVEITGPS
GSSLAQALIGDGIADSEIRIDGYIRKSIGVGIGDEVTVKKAQVQDASKVVLAPTQPISFS
QSFVEYVKDWLMDKPLSRGETISVPTYVGSIDFVVVSTQPSQSVRVTGRTSLEIRQEPVK
ETAAVPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTL
LARALANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKR
EEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPD
AKARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKIN
LEQEQIPVDVLKELKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLRE
AVEWPLKFPEMFEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKW
VGESEKAVREIFRRARQTAPCVIFFDEIDSIAPMRGFTHDSGVTERIVNQLLSEMDGIQS
LNRVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLE
ELAKKLEGYTGADIEALARETTMKVLRQKYYECLNKAKKECKDQECSDKTIKNCMSNLEI
KITMQDFLDTMKVVTPSLTKADIMRYENMVKEIKRSVIG
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgagaaagacttattttaaacgtttcggaaagatgattaatatgtcccaacaattaaaa
ttgagagtggtagaagctaggcaaagagatgttggtaggaaggtcgccagaataactgat
tacactatgagtaggttaggaatagagaacggtgattatgtagagattactgggccttca
ggatcttcattggcacaagcgttaataggagatggaatagcggacagtgagataagaata
gatggttacattagaaaatccataggagtgggtattggagatgaagttacggtaaagaaa
gcacaagtgcaagatgctagcaaggtagttttagctccaacacaacctatttcctttagc
caaagttttgtagaatatgttaaagactggttaatggataaacctctaagcagaggagaa
acaatttctgttcctacttacgttggatccatagacttcgttgtagtttcaacacagcct
tcacaatctgtaagagttacaggtagaacttccttagagataagacaagaaccagtaaag
gaaactgcagcagtacctaaggtgacttgggaagatattggcgaccttgaagacgtaaag
gagaaaataagagaaatagtagaacttccaatgagacatccggaagttttccagcatcta
ggaatagaaccacctaagggtgtattactatatggaccaccaggagttggaaaaacctta
ttggctagggcacttgctaatgaaataggtgcgtacttcacttcaatcaatggaccagaa
ataatgagtaaattctacggtgaaagtgaacagagactaagggaaatctttgaggaggcg
gaaaagaacgcgccagctataattttcatcgatgaaatagatgcgatagcaccaaagagg
gaagaagttaccggagaagtagagaaaagagtggtagcgcaattgttgactctaatggat
ggaattaaaggaagaggaaaagtaatagtcataggagcaactaatagaccagatgctgta
gatccggcattaagaagaccaggtagatttgatagggaaatagagattagaccgcctgac
gctaaggctagaaaagagattctacaagtacatactagaaatatgcctctagctgaggat
gtggatttagataaaatctccgaacagactcacggctatactggagctgatctagcagct
ctagctagagaagcagcaatgaatgccttaagaaggtttattaatgaacgcaaaattaat
ctagaacaagaacaaataccagtcgatgtcttaaaggaattgaaagtaactatgcaagat
ttcattgacgccatgaagttcatccaaccaacactccttagagaagtatatgtggaagtg
ccaaaagttaaatgggaggatattggaggattggaagaagctaaacagcaattaagagaa
gctgttgagtggccattaaaattcccagaaatgttcgaaaagcttggtattagaccacct
aagggtatattattatttggtccaccaggaactggaaagacgatgcttgcaaaggctgtt
gcaactgaaagcggagcaaacttcatagcagtgagaggaccagaaatattatccaaatgg
gtgggtgaaagtgaaaaagcagttagggaaatatttaggagggcaaggcaaacggctcct
tgtgtaatattctttgatgaaatagattcgattgcgcccatgagaggctttacacacgat
tccggtgtaacagaaagaatagtaaatcagttactatcagaaatggatggaatccaatcg
ctaaatagagttgtagttatagctgcaactaatagaccagatattctagatccagctctg
ttaagaccaggtcgatttgatagattaatatatgtccccccacctgacgaaaaggctaga
atagagatactcaaaatttatactaaaacactacccatagattccagtgtgaacctagag
gagttggccaaaaaacttgagggatatactggagctgatatagaggctttagctagggaa
accacaatgaaagtattaagacaaaagtattatgagtgtttaaataaagccaaaaaggag
tgtaaagaccaagagtgtagtgataagaccataaagaattgtatgagcaatctggaaata
aaaatcactatgcaagatttcctagataccatgaaggttgtaacgcctagtctgactaaa
gctgatattatgagatatgaaaacatggtaaaggaaataaagagatcggtgattggttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (40)   
   Pfam (40)   
All databases (43)   

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