KEGG   Trichosurus vulpecula (common brushtail): 118846524
Entry
118846524         CDS       T10126                                 
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118846524 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvp03041]
    118846524 (DHX8)
Enzymes [BR:tvp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     118846524 (DHX8)
Spliceosome [BR:tvp03041]
 Complex C
  Other components
   Step II factors
    118846524 (DHX8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 GIPC1_GH2 AAA_19 nSTAND3 Flavi_DEAD T2SSE AAA_16 TsaE PhoH ABC_tran Sigma54_activ_2 Transformer Cas3-like_C_2
Other DBs
NCBI-GeneID: 118846524
NCBI-ProteinID: XP_036611073
Position
4:complement(181177354..181208386)
AA seq 1202 aa
MAEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKVSLTK
NGAEFTDSLISNLLRLIQTMRPPAKPFANKDPVVKPKTEKEKLKDLFPALCRPDNPAVRT
MLDEDDVKVAVDVLKELEALMPSAAAHEKQRGSEHRDRAKKKKRSRSRSRDRDHKRRHRS
RSRSRSRTRDRNKGKSRYRSRSRSQSPIKDRKDRDKYGDRDKYGEKNSDRWRDKHVDRPP
PEEPSIGEIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQR
VKVKVLSFTGTKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSA
PEVEDDTLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLE
IELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEM
DSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSI
IEQRESLPIFKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQP
RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQ
YAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIP
GRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMK
SLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPG
FVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVP
EIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGR
RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT
EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK
ATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT
KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFR
RR
NT seq 3609 nt   +upstreamnt  +downstreamnt
atggctgagccgggacccgccgaagagctcgccaagctcgagtacctgtccctcgtgtcc
aaagtgtgcaccgagctggacaaccacctggggatcaacgacaaggacctggctgaattt
gtgatcaatcttgctgagaaaaatacaacctttgacacatttaaagtttccctcaccaaa
aatggtgctgaattcacagactctcttataagcaacttgttacgtctcatacagaccatg
cggcccccagcaaagccttttgctaacaaagatccagttgttaaaccaaagacagagaag
gagaagctcaaggacttgttcccagcactttgccgaccagacaatcctgcagtccggacc
atgcttgatgaagatgatgtgaaagtagctgtggatgtcctcaaagagctagaagctcta
atgcccagtgctgcagcacatgagaagcagagaggctctgaacaccgtgatagggcaaaa
aagaagaaacgaagtcggagtcgaagccgagacagagaccacaaacggagacaccggtct
cgatcgaggtcacgttctaggactcgagatcggaataaagggaaatctagataccgatct
aggagcagaagtcaaagtcctatcaaagaccgtaaggaccgtgacaaatatggggaccgt
gataaatacggggagaagaacagtgacaggtggcgagacaaacatgtggaccggcctcct
cctgaagagccttctattggggaaatttataatggcaaagtcacgagtatcatgcagttt
gggtgtttcgtgcaactagaaggactcaggaaacggtgggaaggtttagtccacatctct
gagcttcgtcgggaaggccgagtagccaatgtcgctgatgttgtgagcaaaggccagagg
gttaaggtgaaagtcttgtctttcactgggaccaaaaccagtctgagcatgaaggatgtg
gatcaagatactggagaagatctgaaccccaatcgacggaggaaccttgttggggagacc
aatgaggagacctctatgaggaaccctgatagacctactcacctctccctcgtcagtgcc
ccagaagtggaagatgacactcttgaaaggaaacgcctcacccgaatctcagatcctgag
aaatgggagatcaaacagatgattgcagccaatgtactttccaaagaagagtttccagac
tttgatgaagagacaggaatccttcctaaagtggatgatgaagaagatgaagacctggaa
attgaactggttgaggaagaacctccattcctgagaggacacaccaaacaaagcatggac
atgagccctattaaaattgttaagaatcctgatggctccctgtcccaagcagcaatgatg
cagagtgctttggccaaagaaaggagagaactcaagcaggcccagcgggaagcagagatg
gattccattcctatgggactcaacaaacactgggtggatcctctgcctgatgtggatggg
aggcagattgctgccaacatgcggggcattgggatgatgcctaatgacatcccagaatgg
aagaagcatgcttttgggggcaacaaagcatcttacggtaaaaagacccagctgtcaatc
atcgagcagagggaaagtctccccatcttcaaacttaaagagcagcttgttcaggctgtt
catgacaatcagattctgattgtgattggagagacaggttctgggaagacaacacagatc
acacagtaccttgctgaggcaggttacacatccagggggaaaattggatgtacacaacct
cgaagggttgcggcgatgtcagtggccaaaagagtgtctgaggagtttggttgttgcttg
ggacaagaggtgggttacactattcgttttgaagattgtaccagtccagaaacagtcatc
aagtacatgacagatggtatgttgctcagggaatgtttgattgaccccgaccttactcag
tatgcaatcatcatgttggacgaggctcatgagagaacaattcacacagatgtgctcttc
ggattgttgaaaaagactgtgcagaaacggcaagacatgaagctgattgttacttctgcc
acattagatgctgtgaaattttcccagtatttctatgaagctcccattttcaccattcca
ggccgaacatatccagtggaaattctctacactaaagaacccgagacagattacttggat
gccagcttgatcacagttatgcagatccatttaactgaaccaccaggtgacatcctggtg
tttctgactggtcaggaagagattgatactgcctgtgagatcttgtatgaacgcatgaag
tctctgggtcctgatgtacctgaattaatcatcctccctgtgtattctgctctaccaagt
gagatgcagacccggatctttgacccagctcctcctggtagcaggaaggttgtaatcgct
accaacattgctgagacatctctgactattgatgggatctactacgtggtggaccccggg
tttgtgaagcagaaagtgtacaactccaagacggggatcgaccagctggtggtgactccc
atctctcaggcacaggcaaagcagagagcaggcagagctgggagaacagggcccggaaag
tgttacaggctttacacagaacgtgcctaccgagatgaaatgctgaccaccaacgtgcct
gagatccagaggactaatttagctagcacggtgctctctctcaaggccatgggtatcaat
gacctgctctcctttgacttcatggatgcccccccaatggaaactctgattacagccatg
gagcagctgtacacgctgggagccctggatgacgagggtctgctcacccgtctgggccgt
aggatggcagagtttcccttggagccaatgttgtgcaagatgctgatcatgtctgtgcat
ttgggctgcagtgaggagatgctcaccatcgtgtccatgctgtcagtgcagaacgtcttc
tacaggcccaaggacaaacaagccctcgcagatcagaagaaagccaaattccaccagact
gaaggcgatcacctcactctcctggctgtgtacaattcttggaagaacaacaaattctcc
aacccgtggtgttatgaaaatttcatccaggctcgctccttgcgccgagcccaggacatc
cgtaaacagatgttgggcatcatggataggcataaactggatgtggtgtcctgtggcaag
gctacagtccgtgtacagaaagccatttgcagtggtttcttccgaaatgctgccaagaag
gacccacaggagggctatcgaactttgattgaccagcaggtggtctacattcatccctcc
agcgctctcttcaacagacagccagaatgggtggtataccatgagctggtgctgaccacc
aaggagtacatgcgggaggtcaccaccattgacccccggtggctagtggagtttgcccca
gccttcttcaaggtctcggaccccacgaagctcagcaagcagaagaagcagcagcggctg
gagcccttgtacaaccgctatgaggagcctaatgcttggaggatctcccgtgctttccgg
cggcggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (23)   

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