KEGG Orthology (KO) - Paraburkholderia phytofirmans PsJN

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 09100 Metabolism

 





   09101 Carbohydrate metabolism





     00010 Glycolysis / Gluconeogenesis [PATH:bpy00010]





     00020 Citrate cycle (TCA cycle) [PATH:bpy00020]





       Bphyt_3184 Citrate synthase
       Bphyt_5525 citrate synthase I
       Bphyt_4013 citrate synthase
       Bphyt_4213 Citrate synthase
       Bphyt_6851 citrate synthase I
       Bphyt_6863 aconitate hydratase 1
       Bphyt_2047 aconitate hydratase 2
       Bphyt_3169 isocitrate dehydrogenase, NADP-dependent
       Bphyt_4080 isocitrate dehydrogenase, NADP-dependent
       Bphyt_2120 2-oxoglutarate dehydrogenase, E1 subunit
       Bphyt_1640 2-oxoglutarate dehydrogenase, E1 subunit
       Bphyt_1641 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
       Bphyt_2589 dihydrolipoamide dehydrogenase
       Bphyt_1642 dihydrolipoamide dehydrogenase
       Bphyt_3291 succinyl-CoA synthetase, alpha subunit
       Bphyt_3292 succinyl-CoA synthetase, beta subunit
       Bphyt_4800 succinate CoA transferase
       Bphyt_6854 succinate dehydrogenase, flavoprotein subunit
       Bphyt_6853 succinate dehydrogenase and fumarate reductase iron-sulfur protein
       Bphyt_6856 succinate dehydrogenase, cytochrome b556 subunit
       Bphyt_6855 succinate dehydrogenase, hydrophobic membrane anchor protein
       Bphyt_1413 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
       Bphyt_2947 fumarate hydratase, class II
       Bphyt_6858 malate dehydrogenase
       Bphyt_0304 Phosphoenolpyruvate carboxykinase (GTP)
       Bphyt_3972 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Bphyt_2591 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Bphyt_5918 alpha/beta hydrolase fold
       Bphyt_2590 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase



K01647 CS; citrate synthase [EC:2.3.3.1]
K01647 CS; citrate synthase [EC:2.3.3.1]
K01647 CS; citrate synthase [EC:2.3.3.1]
K01647 CS; citrate synthase [EC:2.3.3.1]
K01647 CS; citrate synthase [EC:2.3.3.1]
K01681 ACO; aconitate hydratase [EC:4.2.1.3]
K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
K00241 sdhC; succinate dehydrogenase cytochrome b subunit
K00242 sdhD; succinate dehydrogenase membrane anchor subunit
K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]





     00030 Pentose phosphate pathway [PATH:bpy00030]





     00040 Pentose and glucuronate interconversions [PATH:bpy00040]





     00051 Fructose and mannose metabolism [PATH:bpy00051]





     00052 Galactose metabolism [PATH:bpy00052]





     00053 Ascorbate and aldarate metabolism [PATH:bpy00053]





     00500 Starch and sucrose metabolism [PATH:bpy00500]





     00520 Amino sugar and nucleotide sugar metabolism [PATH:bpy00520]





     00620 Pyruvate metabolism [PATH:bpy00620]





     00630 Glyoxylate and dicarboxylate metabolism [PATH:bpy00630]





     00640 Propanoate metabolism [PATH:bpy00640]





     00650 Butanoate metabolism [PATH:bpy00650]





     00660 C5-Branched dibasic acid metabolism [PATH:bpy00660]





     00562 Inositol phosphate metabolism [PATH:bpy00562]





 







   09102 Energy metabolism





 







   09103 Lipid metabolism





 







   09104 Nucleotide metabolism





 







   09105 Amino acid metabolism





     00250 Alanine, aspartate and glutamate metabolism [PATH:bpy00250]





     00260 Glycine, serine and threonine metabolism [PATH:bpy00260]





     00270 Cysteine and methionine metabolism [PATH:bpy00270]





     00280 Valine, leucine and isoleucine degradation [PATH:bpy00280]





     00290 Valine, leucine and isoleucine biosynthesis [PATH:bpy00290]





     00300 Lysine biosynthesis [PATH:bpy00300]





     00310 Lysine degradation [PATH:bpy00310]





       Bphyt_6596 Aldehyde Dehydrogenase
       Bphyt_1641 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
       Bphyt_2589 dihydrolipoamide dehydrogenase
       Bphyt_1642 dihydrolipoamide dehydrogenase
       Bphyt_0776 acyl-CoA dehydrogenase domain protein
       Bphyt_3485 Enoyl-CoA hydratase/isomerase
       Bphyt_1850 acetyl-CoA acetyltransferase
       Bphyt_1927 acetyl-CoA acetyltransferase
       Bphyt_0461 acetyl-CoA acetyltransferase
       Bphyt_1673 acetyl-CoA acetyltransferase
       Bphyt_4419 acetyl-CoA acetyltransferase
       Bphyt_1844 acetyl-CoA acetyltransferase
       Bphyt_5904 aminoglycoside phosphotransferase
       Bphyt_2599 aspartate racemase
       Bphyt_6109 succinic semialdehyde dehydrogenase
       Bphyt_2203 Aldehyde Dehydrogenase
       Bphyt_6931 succinic semialdehyde dehydrogenase
       Bphyt_4518 succinic semialdehyde dehydrogenase
       Bphyt_5741 FAD dependent oxidoreductase
       Bphyt_2825 L-carnitine dehydratase/bile acid-inducible protein F
       Bphyt_6352 protein of unknown function DUF849
       Bphyt_0499 aminotransferase class IV
       Bphyt_4480 FAD dependent oxidoreductase
       Bphyt_2070 FAD dependent oxidoreductase
       Bphyt_4907 ornithine cyclodeaminase/mu-crystallin
       Bphyt_5195 Aldehyde dehydrogenase (NAD(+))
       Bphyt_6154 Aldehyde Dehydrogenase
       Bphyt_6025 Aldehyde Dehydrogenase
       Bphyt_1095 Aldehyde Dehydrogenase
       Bphyt_7193 Aldehyde Dehydrogenase
       Bphyt_5518 Aldehyde Dehydrogenase
       Bphyt_1517 Aldehyde Dehydrogenase



K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K18201 AGPHD1; hydroxylysine kinase [EC:2.7.1.81]
K25316 racX; amino-acid racemase [EC:5.1.1.10]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
K00824 dat; D-alanine transaminase [EC:2.6.1.21]
K26064 amaD; D-lysine oxidase
K26064 amaD; D-lysine oxidase
K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]





     00220 Arginine biosynthesis [PATH:bpy00220]





     00330 Arginine and proline metabolism [PATH:bpy00330]





     00340 Histidine metabolism [PATH:bpy00340]





     00350 Tyrosine metabolism [PATH:bpy00350]





     00360 Phenylalanine metabolism [PATH:bpy00360]





     00380 Tryptophan metabolism [PATH:bpy00380]





       Bphyt_3229 tryptophan 2,3-dioxygenase
       Bphyt_3227 arylformamidase
       Bphyt_3228 kynureninase
       Bphyt_1473 kynureninase
       Bphyt_1471 3-hydroxyanthranilate 3,4-dioxygenase
       Bphyt_1472 Aminocarboxymuconate-semialdehyde decarboxylase
       Bphyt_1465 2-hydroxymuconic semialdehyde dehydrogenase
       Bphyt_1470 Endoribonuclease L-PSP
       Bphyt_1641 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
       Bphyt_2589 dihydrolipoamide dehydrogenase
       Bphyt_1642 dihydrolipoamide dehydrogenase
       Bphyt_0776 acyl-CoA dehydrogenase domain protein
       Bphyt_3485 Enoyl-CoA hydratase/isomerase
       Bphyt_1850 acetyl-CoA acetyltransferase
       Bphyt_1927 acetyl-CoA acetyltransferase
       Bphyt_0461 acetyl-CoA acetyltransferase
       Bphyt_1673 acetyl-CoA acetyltransferase
       Bphyt_4419 acetyl-CoA acetyltransferase
       Bphyt_1844 acetyl-CoA acetyltransferase
       Bphyt_5195 Aldehyde dehydrogenase (NAD(+))
       Bphyt_6154 Aldehyde Dehydrogenase
       Bphyt_6025 Aldehyde Dehydrogenase
       Bphyt_1095 Aldehyde Dehydrogenase
       Bphyt_7193 Aldehyde Dehydrogenase
       Bphyt_5518 Aldehyde Dehydrogenase
       Bphyt_1517 Aldehyde Dehydrogenase
       Bphyt_4729 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
       Bphyt_2715 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
       Bphyt_7181 nitrile hydratase, alpha subunit
       Bphyt_5089 nitrile hydratase, alpha subunit
       Bphyt_5090 nitrile hydratase beta subunit
       Bphyt_7182 Nitrile hydratase
       Bphyt_0390 Amidase
       Bphyt_2164 Amidase
       Bphyt_5251 Amidase
       Bphyt_2170 Amidase
       Bphyt_6043 Amidase
       Bphyt_5750 Amidase
       Bphyt_5754 Acetamidase/Formamidase
       Bphyt_5709 Amidase
       Bphyt_6420 Amidase
       Bphyt_5392 Catalase
       Bphyt_0712 Catalase
       Bphyt_4983 Catalase domain protein
       Bphyt_6722 Catalase domain protein
       Bphyt_4741 peroxidase
       Bphyt_2078 catalase/peroxidase HPI



K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
K07130 kynB; arylformamidase [EC:3.5.1.9]
K01556 KYNU; kynureninase [EC:3.7.1.3]
K01556 KYNU; kynureninase [EC:3.7.1.3]
K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K01426 E3.5.1.4; amidase [EC:3.5.1.4]
K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
K03781 katE; catalase [EC:1.11.1.6]
K03781 katE; catalase [EC:1.11.1.6]
K03781 katE; catalase [EC:1.11.1.6]
K03781 katE; catalase [EC:1.11.1.6]
K03781 katE; catalase [EC:1.11.1.6]
K03782 katG; catalase-peroxidase [EC:1.11.1.21]





     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bpy00400]





 







   09106 Metabolism of other amino acids





 







   09107 Glycan biosynthesis and metabolism





 







   09108 Metabolism of cofactors and vitamins





     00730 Thiamine metabolism [PATH:bpy00730]





     00740 Riboflavin metabolism [PATH:bpy00740]





     00750 Vitamin B6 metabolism [PATH:bpy00750]





     00760 Nicotinate and nicotinamide metabolism [PATH:bpy00760]





     00770 Pantothenate and CoA biosynthesis [PATH:bpy00770]





     00780 Biotin metabolism [PATH:bpy00780]





     00785 Lipoic acid metabolism [PATH:bpy00785]





       Bphyt_0503 lipoate-protein ligase B
       Bphyt_5917 lipoic acid synthetase
       Bphyt_0504 lipoic acid synthetase
       Bphyt_2589 dihydrolipoamide dehydrogenase
       Bphyt_1642 dihydrolipoamide dehydrogenase
       Bphyt_3972 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Bphyt_2591 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Bphyt_5918 alpha/beta hydrolase fold
       Bphyt_2590 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
       Bphyt_2120 2-oxoglutarate dehydrogenase, E1 subunit
       Bphyt_1640 2-oxoglutarate dehydrogenase, E1 subunit
       Bphyt_1641 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
       Bphyt_3882 glycine dehydrogenase
       Bphyt_3880 glycine cleavage system T protein
       Bphyt_3881 glycine cleavage system H protein



K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
K03644 lipA; lipoyl synthase [EC:2.8.1.8]
K03644 lipA; lipoyl synthase [EC:2.8.1.8]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K02437 gcvH; glycine cleavage system H protein





     00790 Folate biosynthesis [PATH:bpy00790]





     00670 One carbon pool by folate [PATH:bpy00670]





     00830 Retinol metabolism





     00860 Porphyrin metabolism [PATH:bpy00860]





     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bpy00130]





 







   09109 Metabolism of terpenoids and polyketides





 







   09110 Biosynthesis of other secondary metabolites





 







   09111 Xenobiotics biodegradation and metabolism





 







   09112 Not included in regular maps





 







 09120 Genetic Information Processing





 







 09130 Environmental Information Processing





 







 09140 Cellular Processes





 







 09150 Organismal Systems





 







 09160 Human Diseases





 







 09180 Brite Hierarchies





 







 09190 Not Included in Pathway or Brite













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Last updated: April 24, 2024